Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0590 ATGGAAGCGGATGGAAAACAAGGCCAGGAGGGATCCCCAGAGCTTTCCCTTCGGCCGCTGGATCTTTCTGACATAGATGATTTCATGGTCTGGGCCACAGATGACAAGGTGAGTCGTTTCTGCACTTGGGACACTTACACTTCCAAGGAAGCTGGCATCGACTACATCAAAAACATCGTCATTCCTCACCCATGGTTCAAAGCAATTTGCCTTGACAATAAGGCGATCGGGGCTATTTCAGTGTCCGCAAACAATGGCAACGATCGATGTAGAGGTGAACTTGGGTATGCGCTAGCTTCCAAGTACTGGGGAAAGGGGATTGTGACCAGGGCCGTGAAAATGGTGGCTTCTACTATATTTAATGAGTGGCCACATTTGGAGAGACTGGAGGCGCTGGTGGATGTGGAGAATGGTGGGTCGCAGAGGGTGCTAGAGAAGGTTGGGTTCCAGAGAGAAGGTGTTCTTAGGAAGTTCGTTATTCTGAAGGGCAGATGTAGAGATCTGGTGATTTATAGTCTCCTGTCTACTGATCCCCAACCTTGA 543 0.4936 MEADGKQGQEGSPELSLRPLDLSDIDDFMVWATDDKVSRFCTWDTYTSKEAGIDYIKNIVIPHPWFKAICLDNKAIGAISVSANNGNDRCRGELGYALASKYWGKGIVTRAVKMVASTIFNEWPHLERLEALVDVENGGSQRVLEKVGFQREGVLRKFVILKGRCRDLVIYSLLSTDPQP* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0590 180 Gene3D - 11 179 - -
Vvi5g0590 180 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 15 175 IPR000182 GO:0016747
Vvi5g0590 180 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 177 - -
Vvi5g0590 180 Pfam Acetyltransferase (GNAT) domain 15 150 IPR000182 GO:0016747
Vvi5g0590 180 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 13 174 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0590 Vvi-Chr5 5408344 5408886 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi5g0590 Acetyltransf_3 5.9e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0590 - - vvi:100233116 371.318