Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0588 ATGGAGGCGGATGGAAAACAAGGCCAGGAGGGATCCCCAGAGCTTTCCCTCCGGCCGCTGGATCTTTCTGACATAGATGATTTCATGGTCTGGGCCACAGATGACAAGGTGAGTCGTTTCTGCACTTGGGACACTTACACTTCCAAGGAAGCTGGCATCGACTATATCAAAAACATCGTCATTCCTCACCCATGGTTCAAAGCAATTTGCCTTGACAATAAGGCGATCGGGGCTATTTCAGTGTCCGCAAACAATGGCAACGATCGATGTAGAGGTGAACTTGGGTATGTGCTAGCTTCCAAGTACTGGGGAAAGGGGATTGTGACCAGGGCCGTGAAAATGGTGGCTTCTACTATATTTAATGAGTGGCCACATTTGGAGAGACTGGAGGCGCTGGTGGATGTGGAGAATGGTGGGTCGCAGAGGGTGCTAGAGAAGGTTGGGTTCCAGAGAGAAGGTGTTCTTAGGAAGTTCGTTATTCTGAAGGGCAGATGTAGAGATATGGTGATTTATAGTCTCCTGTCTACTGATCCCCAACCTTGA 543 0.4917 MEADGKQGQEGSPELSLRPLDLSDIDDFMVWATDDKVSRFCTWDTYTSKEAGIDYIKNIVIPHPWFKAICLDNKAIGAISVSANNGNDRCRGELGYVLASKYWGKGIVTRAVKMVASTIFNEWPHLERLEALVDVENGGSQRVLEKVGFQREGVLRKFVILKGRCRDMVIYSLLSTDPQP* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0588 180 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 177 - -
Vvi5g0588 180 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 15 176 IPR000182 GO:0016747
Vvi5g0588 180 Gene3D - 11 179 - -
Vvi5g0588 180 Pfam Acetyltransferase (GNAT) domain 15 150 IPR000182 GO:0016747
Vvi5g0588 180 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 13 174 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0588 Vvi-Chr5 5401379 5401921 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi5g0588 Acetyltransf_3 4.5e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0588 - - vvi:100240811 371.703