Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0587 ATGGAGTCCTCCAGAATCTCTCTCCGACCATTCAAGCTTTCCGATGTGGAGGACTTCATGTCATGGGCTGGTGATGATAGAGTAACGCGCTATCTAAGATGGAACACCATCACCTCTAGGGAAGAGGCCTTCAAGTATCTGAAGGAGGTGGCTATACCCCACCCCTGGCGTCGATCCATATGTTTGGACGACCAGTCCATCGGATACATTTCTGTGAAGCCTGAATCAGGCGACGACAGATGCAGAGCACATATAGGGTATGCGCTGGGCTGGGAGTACTGGGGACAAGGGATCGTCACAGTGGCATTGAAGATGGCTCTCTCTATTGTGTTCAAGGAATTCCCAGATTTGGTGAGGGTGCAAGCCTTGGTAGAAGTAGAAAATAAGGGGTCCCAAAGGGTGCTAGAGAAGGTCGGGTTCCTGAAGGAAGGGTTGGTGAGGAAGTATGGGTTTAATAAAGGTGAGGTTAGAGACATGTTCATCTATGGCTTCCTGTCCACCGACCCAATTCCTGATTGA 519 0.499 MESSRISLRPFKLSDVEDFMSWAGDDRVTRYLRWNTITSREEAFKYLKEVAIPHPWRRSICLDDQSIGYISVKPESGDDRCRAHIGYALGWEYWGQGIVTVALKMALSIVFKEFPDLVRVQALVEVENKGSQRVLEKVGFLKEGLVRKYGFNKGEVRDMFIYGFLSTDPIPD* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0587 172 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 171 IPR000182 GO:0016747
Vvi5g0587 172 Pfam Acetyltransferase (GNAT) domain 5 140 IPR000182 GO:0016747
Vvi5g0587 172 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 2 165 IPR016181 -
Vvi5g0587 172 Gene3D - 1 169 - -
Vvi5g0587 172 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0587 Vvi-Chr5 5399371 5399889 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi5g0587 Acetyltransf_3 1.9e-24 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0587 - - vvi:100261442 354.369