Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0571 ATGTCCAGCATCATCTGGAAGAATTTCAACCTCTGTCTCTCAAAATTGAAATGCTTTCCCACGACTCTACCATCCTCTCCGCCTTCCAAACATGACCACAATCGTCATCCATCATCGTCATCGTCATCATCCATTTCTTCTACCTCGTCAGTCCTCATCAAGAACTTCAACTCCCTCTACGACCTCACTTCTGATTCCACCTCCAAATCGCTCACCCGCACGACCGACGACTTTTTATCCACCTCCGAGGATTCTGTTGACTCAGAATCACCTCCTGATTTCGCCACCGTCTTTGCCTCCCAACGCTTCTTCTTCTCATCCCCTGGCCGCTCGAACTCCATTTTCGAGGCCTCGGAGTCCCCGCCGGAGTCTGACTCAATTGTCAACGGAGGTGTCGCGGTTCATACTTACTCACCCAACCCGTACGAGGATTTCCGGCGATCAATGCAGGAGATGGCGGAAGCGAGAGAGTTGAGGGACGTGGCGGCTGATTGGGACTACTTGCATGAGCTGCTCCTCTGCTATCTCACACTCAACCCCAAACACACCCACAAGTTCATCATCCGCGCTTTCGCCGACCTTATCGTTTGCCTCATGTCCTCAACCGCCTCAGATGGCCGCCGGGGCTCAGCCGGCCCGCAAAGACACGGTGCTTCCCAGTGGTTCGCTTAA 672 0.5357 MSSIIWKNFNLCLSKLKCFPTTLPSSPPSKHDHNRHPSSSSSSSISSTSSVLIKNFNSLYDLTSDSTSKSLTRTTDDFLSTSEDSVDSESPPDFATVFASQRFFFSSPGRSNSIFEASESPPESDSIVNGGVAVHTYSPNPYEDFRRSMQEMAEARELRDVAADWDYLHELLLCYLTLNPKHTHKFIIRAFADLIVCLMSSTASDGRRGSAGPQRHGASQWFA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0571 223 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 38 200 IPR038933 GO:0045892
Vvi5g0571 223 MobiDBLite consensus disorder prediction 203 223 - -
Vvi5g0571 223 Pfam Transcriptional repressor, ovate 138 198 IPR006458 -
Vvi5g0571 223 NCBIfam uncharacterized plant-specific domain TIGR01568 132 199 IPR006458 -
Vvi5g0571 223 ProSiteProfiles OVATE domain profile. 134 197 IPR006458 -
Vvi5g0571 223 MobiDBLite consensus disorder prediction 24 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0571 Vvi-Chr5 5284997 5285668 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vvi5g0571 Ovate 3.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0571 - - vvi:100261343 405.601