Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0523 ATGGATTCCACCGTTACCAAGGAGGTGGCTACGGAGCTTCTCCCAATCATCAGAGTCTACAAAGATGGCACCGTCGAGCGACTTATGGCCTCCCCCATAGTTCCACCATTTCCGGAAGGAGACCCACAAACTGGAGTCTTATCCAAAGACATAAGCTTCAGCATCACCCCAGACTCCAGTATCTCCGCCAGACTCTACCTCCCAAAACTCCCGGACCAGCAATCCCATAAGCTACCTATCTTAGTCTACTTCCATGGCGGCGGATTCTGCATCGAATCCGCCTCCTCCTTCCTCGTCCACCGCTACCTCAACATCTTGGTCTCCCAAGCTAAAGTGGTTGTTGTGTCCGTTGATTACAGGCTCGCTCCTGAGCACCTTCTACCCATCGCCTATGACGACTGCTGGGATGCTCTCAATTGGGTCGCGTCACACTCCGCCAGAGGCGCGACTGATAAAGAACCGTGGCTGCTGGAATATGGCGACTTCGAACGACTCTTCATTGGCGGCGACAGTTCTGGAGGCAACATCGTTCATAACATGGCCATACGGGGCGGGGTTAGAATTTCAGGAGCGTTTCTGGTGGACCCCTATTTTTGGGGTTCAAAGCCAATCGGGTCCGAGCCGAAGGAAGGACATGAAGAGAGTTTACTTTCTCGGCTATGGAAGTTAGTGTATCCGTCTAGTGGGCTGGATGATCCACTGATCAATCCGGTTGGTCCCGGAGCGCCGAGTTTGGCGGGGCTCGGGTGCTCTCGGATGCTTGTTTGTGTTGCTGAGAAGGATATATTGAGGGACAGAGGGGTTGCGTACATTGATGCAGTGAGAACAAGTGGGTGGGAAGGAGATGTGGATCTGTTCGAAGCTGAGGGAGAGAACCATGGTCATCATATCTTCTATCCAGAAACTGACAAAGCCAAGGAAATGTTCCAACGCTTGGCTTCTTTTCTAAACCACTGA 957 0.5225 MDSTVTKEVATELLPIIRVYKDGTVERLMASPIVPPFPEGDPQTGVLSKDISFSITPDSSISARLYLPKLPDQQSHKLPILVYFHGGGFCIESASSFLVHRYLNILVSQAKVVVVSVDYRLAPEHLLPIAYDDCWDALNWVASHSARGATDKEPWLLEYGDFERLFIGGDSSGGNIVHNMAIRGGVRISGAFLVDPYFWGSKPIGSEPKEGHEESLLSRLWKLVYPSSGLDDPLINPVGPGAPSLAGLGCSRMLVCVAEKDILRDRGVAYIDAVRTSGWEGDVDLFEAEGENHGHHIFYPETDKAKEMFQRLASFLNH* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0523 318 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 81 97 IPR002168 GO:0016787
Vvi5g0523 318 Pfam alpha/beta hydrolase fold 81 296 IPR013094 GO:0016787
Vvi5g0523 318 Gene3D alpha/beta hydrolase 3 317 IPR029058 -
Vvi5g0523 318 PANTHER ARYLACETAMIDE DEACETYLASE 15 302 - -
Vvi5g0523 318 SUPERFAMILY alpha/beta-Hydrolases 7 317 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0523 Vvi-Chr5 4745806 4746762 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0523 1 317 Carbohydrate Esterase AT3G48700 41.964 5.77e-82 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0523 - K13258 vvi:104879249 645.966