Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0437 ATGAGGTCAGCTAGAGAATGCCTTCTCATTCTCTTGGTTTCTCTTCTTGTATTTGGAGTGGTTCGAATTTGCAATGCAGATGGGTTGAGGAAGAACTTCTATAAGCAGACCTCATGTCCACAAGCTGAGAATGTTGTAAGGAACCTTACAAGGATCAAGGTTCAAGCTAACCCTGCTCTGGCTGCTAAACTGATTAGAATGCAGTTCCATGACTGCTTTGTTAGGGGGTGTGATGCATCTATACTATTGGATAGAGTCGGTACTGATCAGACTGAGAAGGATGCAAGACCCAATCTTTCACTCTCAGGTTACGATGAAATCAATGATATAAAGTCCAAACTTGAGCAGGCTTGCCCAGGAGTGGTTTCCTGTGCTGATATTCTCGCCTTGGCTGCTCGTGATGCTGTCTCCTTCCCATCCCGAACCCCCTTGTGGGATGTTCTTACTGGAAGAAGAGATGGAAACGTTTCTCTAGCCTCTGAAGTCAATGGAAACATACCTTCACCCTTCTCAGACTTCTCCACTCTCAAACAACTATTCGTCAAGAAAGGTCTTAATGTCAACGATCTAGTGGCACTCTCAGGCGCACACACCATTGGGTTTGCCCACTGCGGCACTTTCTCGAGGAGGCTCTACAACTTCACAGGCAAAGGCGATGCAGACCCTTCACTGAATGCAACCTACATTGAATCACTCAAGGCACAGTGTCCAAATCCAGCCAACGCCCAAACAACCGTGGAGATGGATCCTCAGAGTTCAGGCTCGTTTGACAGTAGTTATTTCAATATCCTTGTCCAGAATAAGGGTCTCTTCCAATCCGATGCTGCATTACTCACAGACAAGGCTTCCAGCAAGACAGTGCAACAGCTGCGAAAACCCAGGGCTTTCTTGGACGAGTTTGGTAAGTCCATGAAGAAGATGGCGGCTATAGGAGTGCTTACGGGAAAGGCTGGAGAGATTAGGAAACAGTGTGGGGTAGTAAATTAA 987 0.4671 MRSARECLLILLVSLLVFGVVRICNADGLRKNFYKQTSCPQAENVVRNLTRIKVQANPALAAKLIRMQFHDCFVRGCDASILLDRVGTDQTEKDARPNLSLSGYDEINDIKSKLEQACPGVVSCADILALAARDAVSFPSRTPLWDVLTGRRDGNVSLASEVNGNIPSPFSDFSTLKQLFVKKGLNVNDLVALSGAHTIGFAHCGTFSRRLYNFTGKGDADPSLNATYIESLKAQCPNPANAQTTVEMDPQSSGSFDSSYFNILVQNKGLFQSDAALLTDKASSKTVQQLRKPRAFLDEFGKSMKKMAAIGVLTGKAGEIRKQCGVVN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0437 328 Gene3D Peroxidase, domain 2 167 307 - -
Vvi5g0437 328 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Vvi5g0437 328 CDD secretory_peroxidase 28 327 IPR033905 GO:0004601|GO:0042744
Vvi5g0437 328 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 FunFam Peroxidase 32 183 - -
Vvi5g0437 328 PANTHER PEROXIDASE 25-RELATED 13 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 Gene3D - 32 328 - -
Vvi5g0437 328 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Vvi5g0437 328 ProSiteProfiles Plant heme peroxidase family profile. 28 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0437 328 FunFam Peroxidase 167 307 - -
Vvi5g0437 328 Pfam Peroxidase 48 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0437 Vvi-Chr5 3846201 3847498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0437 29 328 Peroxidase AT2G39040 56.536 4.26e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0437 K00430 - vvi:100254434 642.884