Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0377 ATGGAGGTTTCGCTAGGGCACAAGCGCAAGCAACAGGAGTTCTCTTTGGTCTCAATCTCGCATCTCTCCCCTTCTTCTTCTTCGACTTCTCCTTCTCCTCCAGTGGTCGCTTGCTTCAGTGCCGCTTCTTTAGAGCTTCGATTCCAGCAGGATTCTGACTCCTCTGATGTCATTAAGTTTGATCTCCAAGCTGCTCAGGTATTCAAGTTAAGCCCCGTCCAATCTGTTTGCATATCTGAAGGTTCTGAAGCTGCAAAAGAGAAATCCTATTCAAGGGGAATCGTGATTGAATTTAACAATGAGGAGCAGAGCAAGGCCTTTTATTGTGCGTTTGAGCAATGGAAGAAGGAAGCTTTTGTTCAAGAAGCACAATTACCAAATGGAACTGTTTCAACTTCTAAAAGCAAGTTTGATGATAAGATAGAGGCATCTTCTGCAAAAATGTACTTCCATTACTATGGGCAGTTGCTACATCAGCAAAATATGTTACAAGATTATGTGAGAACAGGAACCTATTTTGCTGCAGTTATTGAGAACCGTACAGATTTTACTGGTCGAGTGGTCGTTGATGTTGGTGCTGGTAGCGGTATATTGTCGTTATTTGCAGCCCAGGCTGGCGCCAAACATGTGTATGCTGTGGAAGCATCTGAAATGGCAGAATACGCACGTAAACTTATTGCTGGAAACCCATCACTGGGTAAACGGATTACAGTAGTGAAAGGTAAAGTCGAGGATGTTGAATTGCCTGAGAAAGCAGATATTCTGATCTCTGAGCCAATGGGCACTTTGTTAGTCAATGAAAGAATGCTGGAGTCCTATGTGATTGCAAGAGATCGGTTCTTGATTCCTGATGGAAAAATGTTTCCTGGAATTGGAAGGATACATATGGCACCATTCAGCGATGAATACTTATTTATTGAAATTGCGAATAAGGCTCTTTTTTGGCAGCAGCAAAGCTATTATGGGGTTGATCTGACTCCCTTGTATGGATCTGCATTCCAGGGATATTTTTCTCAGCCAGTAGTAGATGCTTTTGATCCAAGGTTATTGGTGGCCCCTTCTATATCTCACACTATAGATTTCGCTAAAATAAAGGAAGAAGAGTTGTATGAAATTGAAATCCCACTGAAGTTCATATCCCTTGTGGGTGCTAGAGTGCATGGATTAGCTTGTTGGTTTGATGTGTTGTTTAATGGGAGTACTGTACAAAGATGGCTTACCACTGCCCCTGGTGCCCCAACAACCCATTGGTACCAATTACGTTGTGTTCTATTGCAACCACTTTATGTCATGGCAGGACAAGAAATAACTGGCCAACTTCGCTTGGTTGCTCACAATGCTCAAAGTTATACAATACATTTGACGATGGGAGTTAAAATGTGGGGCCCCGGTGCTGAACAAGGGGAAGTTCTGCAGTCATCATCTTGCAAACTTGATCTTAAAGAACCCTATTATCGGATGTCTCAGCCACAGGCCTATACAGTGGCCCCGGATCAGCAACAACATCCACTAATACACGCACAGGATATACATATTCAAGGCCAGGATGCAGATGAGCCTGACGTTGAGCTCCAATGA 1578 0.4322 MEVSLGHKRKQQEFSLVSISHLSPSSSSTSPSPPVVACFSAASLELRFQQDSDSSDVIKFDLQAAQVFKLSPVQSVCISEGSEAAKEKSYSRGIVIEFNNEEQSKAFYCAFEQWKKEAFVQEAQLPNGTVSTSKSKFDDKIEASSAKMYFHYYGQLLHQQNMLQDYVRTGTYFAAVIENRTDFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPSLGKRITVVKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLIPDGKMFPGIGRIHMAPFSDEYLFIEIANKALFWQQQSYYGVDLTPLYGSAFQGYFSQPVVDAFDPRLLVAPSISHTIDFAKIKEEELYEIEIPLKFISLVGARVHGLACWFDVLFNGSTVQRWLTTAPGAPTTHWYQLRCVLLQPLYVMAGQEITGQLRLVAHNAQSYTIHLTMGVKMWGPGAEQGEVLQSSSCKLDLKEPYYRMSQPQAYTVAPDQQQHPLIHAQDIHIQGQDADEPDVELQ* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0377 525 Gene3D Vaccinia Virus protein VP39 128 289 IPR029063 -
Vvi5g0377 525 Gene3D - 291 500 - -
Vvi5g0377 525 FunFam Probable histone-arginine methyltransferase CARM1 129 289 - -
Vvi5g0377 525 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 152 463 IPR029063 -
Vvi5g0377 525 Pfam Ribosomal protein L11 methyltransferase (PrmA) 184 257 - -
Vvi5g0377 525 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 81 471 IPR025799 GO:0016274|GO:0018216
Vvi5g0377 525 CDD AdoMet_MTases 188 288 - -
Vvi5g0377 525 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 142 457 IPR025799 GO:0016274|GO:0018216
Vvi5g0377 525 FunFam Probable histone-arginine methyltransferase CARM1 291 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0377 Vvi-Chr5 3203162 3217356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0377 149 458 C2H2 Transcription Factor Family AT3G12270 33.837 4.85e-39 148