Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0341 ATGGGTGGCCAGATGCAACAGAGCAATGCTGCGGCGACTGCTCTGTATGATCACCCCGGCGGCGGGACTCTGCACAATGCAGGTCCTGCGAGCGACGCTGGGGATGCAGTCATGGCGCGATGGCTCCAGTCCGCCGGATTGCAGCATCTGGCCTCTCCATTGGCTTCCACCGGAATTGATCATCGCCTCCTCCCCAATCTTCTCATGCAGGGTTATGGAGCACAGTCTGCTGAAGAGAAACAGAGGCTTTTCAAATTGATGAGGAACCTTAATTTTAACGGGGAATCTGGTTCTGAGCCATACACTCCTACTGCCCAAACTTCAGGAGTGGTTGCATCAGAGGGTTTTTATTCTCCTGAATTTAGGGGGGATTTTGGAGCTGGGCTTTTGGATCTTCATGCTATGGATGATACAGAACTCCTATCTGAGCACGTTATATCAGAACCCTTCGAGCCATCACCTTTCATGCCTGGTGCTACGAGAGCATTTGACAATGACTTTAATGTGATGACCAGCAGGCAGCAGAAAGGGCAAACAGAGGCAGATCCTTCAGTTGGATTTCTGGCAAATGAAAAAGAGAACACCAAGGAAAATAATGTGGCTAAGATAAAAGTTGTGGTACGCAAAAGACCTTTAAACAAGAAGGAGCTGTCTCGGAAAGAGGATGACATTGTAACTGTATCTGATAATGCCTATCTCACTGTCCATGAACCCAAGCTAAAGGTGGACTTGACTGCTTATGTGGAGAAGCATGAATTTTGTTTTGATGCCGTTCTGGATGAGCATGTTACTAATGATGAGGTATATCGGGTTACTGTAGAGCCTATCATTCCTATTATTTTTCAGCGAACAAAAGCAACTTGTTTTGCATATGGTCAGACAGGTAGTGGTAAGACGTTTACCATGCAACCTTTACCTCTCAGAGCTGCTGAAGATCTTGTTAGATTGTTGCATCAGCCAACTTATCGGAATCAGAGGTTTAAGTTGTGGCTAAGCTATTTTGAGATATATGGCGGAAAACTCTTTGATCTTCTCAGCGATAGAAAGAAACTTTGTATGAGAGAAGATGGAAGGCAGCAAGTTTGCATTGTTGGACTGCAAGAATTTGAAGTTTTGGATGTACAGATTGTGAAAGAGTATATTGAGAGGGGAAATGCAGCAAGAAGTACAGGCTCTACTGGTGCCAATGAGGAATCTTCAAGGTCACATGCTATTCTACAACTTGTTGTTAAGAAGCACAATGAAATAAAAGATTCCAAGCGTAATAATGACGGAAATGAGGCAAAGGGTGGGAAGATTGTGGGAAAGATTTCTTTTATCGATCTTGCTGGTAGTGAAAGAGGTGCCGACACAACAGACAATGATCGACAAACACGGATTGAGGGAGCTGAAATCAATAAGAGCCTTTTGGCTCTGAAGGAGTGCATTCGTGCTCTTGACAATGATCAGATCCATATTCCATTTCGTGGAAGCAAACTCACAGAGGTGCTTCGTGATTCCTTTGTTGGCAACTCAAGGACTGTCATGATCTCTTGCATTTCTCCAAATGCAGGTTCATGTGAACATACACTCAATACTTTAAGATATGCTGATCGGGTTAAAAGTTTGTCCAAGAGTGGAAATGCAAAAAAGGATCAGGGTGTGAGTTCATTGCCACCTGTTAATAAGGAATCTTCATCAGCAGCATCTTTGCCAGCTTCTGTTGATGTGGAGGATGTTTATGAGCAGCAACCAGAAGTAAAATTAGCAGATATGGGTCGACGGACTGCAGATAAAGAAAGTTCATATAACCATGCTGCTGATTTTGATAGACAGCCCTCTAGTTTCTCTTCCAATTACCCCTTCAATGCACGGGAGGAAAGTGCGGTGGCTCCTGGTCTAATAGACAGGGAGAGGGTTGAAATGAAAAATACTTTTGTTGGTTCTACAAGTCAGAAAATGTACTCTTCATCATATTCCCAAAACTCGGTTGATACAGAAGAGAAAGTGCAAAAGGTGTCACCACCTCGTAGAAAAGTTCCACGAGAAGAAAAATCAGAGAAGCTGGGAAACTGGCTGAAGAAAGAAGGTGGAAATACAGATATGCCCTTCACAAGTTCGAAGCAGCAGAATACCAGCAATTCTAATATAAACAATGTTGTATCCAGGCAATATGAACCTGAACCTCCTAATGATGGGAATATCAATGCTATACTTGAGGAAGAAGAGGCACTCATTGCAGCTCATAGAAAAGAAATTGAAGACACAATGGAGATTGTTCGTGAAGAAATGAAACTGTTAGCAGAAGTAGACCAACCAGGCAGTCTTATCGACAACTACGTTACCCAGCTGAGCTTTGTGCTCTCACGCAAAGCAGCGGGTCTGGTTAGTCTTCAAGCTCGCCTTGCCAGGTTCCAGCATCGACTAAAGGAACAGGAGATTCTTAGCCGGAAAAGGGTGCCCCGTTAA 2448 0.4387 MGGQMQQSNAAATALYDHPGGGTLHNAGPASDAGDAVMARWLQSAGLQHLASPLASTGIDHRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTAQTSGVVASEGFYSPEFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGATRAFDNDFNVMTSRQQKGQTEADPSVGFLANEKENTKENNVAKIKVVVRKRPLNKKELSRKEDDIVTVSDNAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDEHVTNDEVYRVTVEPIIPIIFQRTKATCFAYGQTGSGKTFTMQPLPLRAAEDLVRLLHQPTYRNQRFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVLDVQIVKEYIERGNAARSTGSTGANEESSRSHAILQLVVKKHNEIKDSKRNNDGNEAKGGKIVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSRTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNAKKDQGVSSLPPVNKESSSAASLPASVDVEDVYEQQPEVKLADMGRRTADKESSYNHAADFDRQPSSFSSNYPFNAREESAVAPGLIDRERVEMKNTFVGSTSQKMYSSSYSQNSVDTEEKVQKVSPPRRKVPREEKSEKLGNWLKKEGGNTDMPFTSSKQQNTSNSNINNVVSRQYEPEPPNDGNINAILEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAAGLVSLQARLARFQHRLKEQEILSRKRVPR* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0341 815 PANTHER KINESIN-RELATED PROTEIN 6 31 813 IPR027640 GO:0003777|GO:0007018
Vvi5g0341 815 CDD KISc_KIF2_like 202 534 - -
Vvi5g0341 815 ProSiteProfiles Kinesin motor domain profile. 202 536 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0341 815 MobiDBLite consensus disorder prediction 600 614 - -
Vvi5g0341 815 MobiDBLite consensus disorder prediction 646 708 - -
Vvi5g0341 815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 536 IPR027417 -
Vvi5g0341 815 PRINTS Kinesin heavy chain signature 393 410 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0341 815 PRINTS Kinesin heavy chain signature 436 454 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0341 815 PRINTS Kinesin heavy chain signature 283 304 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0341 815 PRINTS Kinesin heavy chain signature 486 507 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0341 815 FunFam Kinesin-like protein 184 539 - -
Vvi5g0341 815 Gene3D Kinesin motor domain 183 539 IPR036961 -
Vvi5g0341 815 SMART kinesin_4 200 542 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0341 815 Coils Coil 788 808 - -
Vvi5g0341 815 MobiDBLite consensus disorder prediction 586 614 - -
Vvi5g0341 815 MobiDBLite consensus disorder prediction 663 687 - -
Vvi5g0341 815 MobiDBLite consensus disorder prediction 646 662 - -
Vvi5g0341 815 MobiDBLite consensus disorder prediction 540 565 - -
Vvi5g0341 815 ProSitePatterns Kinesin motor domain signature. 435 446 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi5g0341 815 MobiDBLite consensus disorder prediction 693 708 - -
Vvi5g0341 815 Pfam Kinesin motor domain 208 535 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0341 815 Coils Coil 732 763 - -
Vvi5g0341 815 MobiDBLite consensus disorder prediction 538 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0341 Vvi-Chr5 2962423 2970870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0341 194 536 Calmodulin-binding Proteins AT5G65930 34.181 4.90e-42 164