Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0336 ATGAAGGCAACGTCCAATGGATCCTTCCAAGGTGACAATCCCCTGGATTTTGCGCTTCCCCTCCTCATCTTGCAGATATGCCTGGTCGTCGTCTTCACCAGAACGCTTGCCTTGATTCTGAAACCTCTCAGACAGCCCAGAGTCATTGCAGAGATTATCGGAGGAATACTGCTCGGCCCATCTGCGTTGGGGCGAAGTACCAAGTTTCTGCACAGAGTCTTCCCTGCCAGAAGCATGACTGTCCTGGACACTGTGGCCAACATTGGCCTCCTCTTCTTCCTGTTTTTGGTGGGTCTTGAGCTTGACATTCGAGCTATCCGAAGGACCGGCAAACAGTCCCTAGGAATAGCCGTCGTAGGTATCACCTTCCCTTTCGTTCTTGGCATTGGCACTTCAGTTGTTCTACGCTCCACAATTTCCAAGGGAGTAGACCACGCCCCTTTCCTCGTCTTCATGGGCGTCTCCTTGTCCATCACCGCTTTTCCAGTCCTTGCCCGTATCCTAGCAGAGCTGAAACTTCTCACCACTGACGTGGGCCGCATGGCAATGTCAGCGGCCGCCGTCAATGACGTTGCTGCCTGGATTCTCCTCGCACTCGCCATAGCTCTCTCTGGCGATAACACATCACCCCTCGTTTCCGTATGGGTCCTACTCTGTGGCTGTGCGTTTGTGGCAGCAGCTATCCTATTCTTAAGACCGGCACTTGCATTTATGGCTCGGCGCTCCCTTGGAGGCGAACCCGTGAACGAGCTCTACATATGTATTACGCTATCGCTAGTATTGGCTGCAGGTTTCGTCACCGACACAATCGGCATACATGCGCTCTTTGGGGCGTTTGTCGTGGGCATAGTTGTACCCAAAGATGGCCCCTTTGGGGAGATCTTAATAGAGAAGATCGAGGATCTGGTTTCAGGGCTTTTTCTGCCGCTCTACTTTGTATCAAGTGGACTCAAGACCAATGTCGCTACCATAAGCGGTGGCCAATCCTGGGGCCTGCTAGTCCTGGTTATATTCAACGCTTGTTTTGGAAAGATTCTGGGGACGGTTGTGGTCTCCCGCATATTTAAGGTGCCGATGAGGGAGGCTGTTGTACTTGGATTCCTCATGAACACCAAGGGCTTGGTGGAGCTGATCGTCCTCAACATTGGCAAGGACCGGAAGGTGCTGAATGATCAGACTTTTGCTATCTTAGTTCTTATGGCGTTGTTCACCACCTTCATCACCACCCCAATTGTGACCGCCTTGTATAAGCCAGCCAGGAAGATAGCATCTTACACGCACCGGACTGTTCAGCGCAGAGGACCTGATTCAGAGTTCCGTATACTGGCATGCTTCCATAGCACTCGAAACATTCCCACAATGATCAACCTAATAGAGTCTTCCCGTGGGACACGACGCGGGCGTCTTTGTGTGTATGCTATGCACTTGATGGAGCTCTCAGAGCGGTCTTCCGCCATCTCAATGGTACACAAAGCACGCAGAAATGGTCTCCCCTTCTGGAACAAGAAACGTACACACAAAGATCAGATGGTGATAGCATTTGAGGCCTACCAGCAGCTCAGCAGTGTTTCTGTCCGTCCTATGACGGCCATCTCCCCGCTCAACAGTATCCACGAAGACATCTGCACAAGCGCCCACCAAAAGCAAGTGGCCATGATTCTACTCCCATTTCACAAGTATCAGCGTCTGGATGGGGTGATGGAGTCGTTGGGACACTCGTTCCATCTGGTGAACCAGCGGGTCATTCGGCACGCCCCTTGCTCTGTAGGAATCCTTGTAGACCGCGGCCTAGGAGGTACCAGTCAAGTCTCCGCCAGTCACGTGTCTTATTCCATAGCCATTCCTTTTTTTGGTGGACGTGACGACCGTGAAGCTCTGGCATATGGTGTTAGGATGGCCGAGCACCCTGGAATCAAGCTCACAGTCATAAATTTTGTTGCTCCCCCAGGGAAGTCGCTTCTGGATTGGAATTCCGGAGATGGTGCTGCGACAGTCCAAATCAATGAAATAACACAAGACGGAAAAGAAGACAATGACCAACTCTTCTCCGAGCCCAATTTCACGGAAAATGAGTCCATATCCTACGAGAAGCGGGTGGTAGAAGAGAAGGCAGGCATTGTGGCAAAGCTGACATCAATGACCAACACCAACCTCTTCTTGGTGGGGAGAATGTCGGCAGTAGCAGGACTGACAGAAAGAAGCGACTGTCCAGAACTGGGCCCAGTTGGGAGCTTCCTAGCGTCTTCCGAATTCTCCACCACCGCATCGGTTTTAGTTATTCAGCAGTATAACCCCACAGCAAATTTTTCCGCGCTGGCGGAAGAAGAAGCTTCAGAACTCTCAGACGGGCCAGATGATGCACCAGTGTGA 2370 0.5173 MKATSNGSFQGDNPLDFALPLLILQICLVVVFTRTLALILKPLRQPRVIAEIIGGILLGPSALGRSTKFLHRVFPARSMTVLDTVANIGLLFFLFLVGLELDIRAIRRTGKQSLGIAVVGITFPFVLGIGTSVVLRSTISKGVDHAPFLVFMGVSLSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGDNTSPLVSVWVLLCGCAFVAAAILFLRPALAFMARRSLGGEPVNELYICITLSLVLAAGFVTDTIGIHALFGAFVVGIVVPKDGPFGEILIEKIEDLVSGLFLPLYFVSSGLKTNVATISGGQSWGLLVLVIFNACFGKILGTVVVSRIFKVPMREAVVLGFLMNTKGLVELIVLNIGKDRKVLNDQTFAILVLMALFTTFITTPIVTALYKPARKIASYTHRTVQRRGPDSEFRILACFHSTRNIPTMINLIESSRGTRRGRLCVYAMHLMELSERSSAISMVHKARRNGLPFWNKKRTHKDQMVIAFEAYQQLSSVSVRPMTAISPLNSIHEDICTSAHQKQVAMILLPFHKYQRLDGVMESLGHSFHLVNQRVIRHAPCSVGILVDRGLGGTSQVSASHVSYSIAIPFFGGRDDREALAYGVRMAEHPGIKLTVINFVAPPGKSLLDWNSGDGAATVQINEITQDGKEDNDQLFSEPNFTENESISYEKRVVEEKAGIVAKLTSMTNTNLFLVGRMSAVAGLTERSDCPELGPVGSFLASSEFSTTASVLVIQQYNPTANFSALAEEEASELSDGPDDAPV* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0336 789 Gene3D - 470 708 - -
Vvi5g0336 789 PANTHER CATION/H + ANTIPORTER 1 764 - -
Vvi5g0336 789 Pfam Sodium/hydrogen exchanger family 28 414 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi5g0336 789 FunFam Cation/H(+) antiporter 15 21 423 - -
Vvi5g0336 789 FunFam Os05g0276100 protein 463 713 - -
Vvi5g0336 789 Gene3D - 21 424 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0336 Vvi-Chr5 2902932 2906113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0336 1 777 Antiporter Super Family AT3G17630 73.136 0.0 1106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0336 - - vvi:100266624 1501.88