Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0264 ATGGAAGAGACCTTTGTACCATTTCGCGGAATCAAGAATGATCTTCAAGGGAGGCTATTGTGTTACAAGCAAGACTGGACTGGTGGTCTCAGGGCAGGCTTCAGGATTTTGGCCCCCACCACATACATATTTTTTGCTTCAGCAATTCCAGTTATTTCCTTTGGAGAGCAGTTGGAGAAGAATACTGATGGGGTTCTCACGGCAGTTCAAACCTTAGCTTCTACCGCCTTGTGTGGAATTATCCACTCCATCATAGGAGGCCAGCCTTTGCTGATTCTTGGAGTGGCGGAGCCAACTGTACTAATGTATACATTCATGTTCAACTTCGCTAAAGATAGACCAGATTTGGGACCAAAGCTCTTTCTAGCATGGACTGGATGGGTATGTGTGTGGACTTCAGGCTTACTTTTCCTTCTGGCCATCTTAGGAGCTTCCTCCATTATCAATAGGTTCACTCGTATCGCAGGGGAACTGTTTGGCCTGCTTATTGCAATGCTGTTTATGCAGGAAGCTATCAAAGGACTCATAGATGAGTTTCGCATACCAGGAAGAGAAAGTCCGACATTGACAGAATTTCAACCTTCGTGGAGGTTTGCTAATGGGATGTTTGCCCTGGTTCTGTCATTTGGCCTCTTTCTTACTGCGTTAAGAAGCCGAAAAGCGAGGTCTTGGCGTTATGGGTCTGGTTGTCTTCGAGGTTTCATAGCAGATTATGGTGTGCCATTAATGGTTCTGGTGTGGACAGCTGTTTCCTATATACCAGCTGGAAGTATTCCAAAAGGGATCCCACGGCGTCTCTTCAGCCCAAATCCATGGTCACCAGGCTCATATGAGAATTGGACCATCATAAAGGACATGCTGAATGTGCCAGTCCTATATATAATTGGAGCTTTTATTCCAGCAACTATGATTGCTGTACTTTACTATTTTGACCACAGTGTAGCATCTCAACTTGCTCAACAAAAAGAATTCAATCTGAGAAAGCCACCTTCTTTCCATTATGACTTACTTCTTTTGGGTTTCATGGTCATATTGTGTGGTCTCATTGGAATCCCTCCAGCAAATGGTGTCATTCCACAATCTCCAATGCATACCAAAAGTTTGGCTACACTTAAGCATCAGTTGCTTCGCAACCGACTTGTGGAAACAGCACGTAAATGCATCAGGGAGAATTCAAGCTTGGGACAAATGTATGAAAGCATGCAAGAAGCTTATCAACATATGCAGACTCCATTGGTTTACCAGGAACCCTCAGCTCTGTGTGATGGGCAGGGACTAAAAGAATTGAAAGATTCAACTATTCAATTGGCTTCAAGCATGGGGAATATGGAAGCCCCAATTGATGAGACTCTGTTTGATATTGAGAACGAGATTGATGACCTATTACCTGTTGAGGTGAAAGAACAGCGGCTCAGCAACTTGCTTCAGGCCATAATGGTTGGAGGATGTGTTGCAGCCATGCCTTTCCTCAAGAAGATCCCAACATCAGTACTCTGGGGATACTTTGCCTTCATGGCTGTTGAAAGCTTACCTGGTAACCAGTTCTGGGAGCGGATTTTATTACTCTTTACGGCACCAAGTAGAAGATACAAAGTTTTGGAGGACTACCATGCAACTTTTGTGGAAACCGTTCCTTTCAAGACAATTGCAATGTTTACAATTTTCCAGACTGCCTACTTGCTTGTTTGTTTTGGGATTACTTGGGTTCCTATTGCTGGAGTTCTGTTCCCTCTAATGATCATGCTTTTGGTTCCTGTGAGACAATACATTTTGCCCAAGTTTTTCAAAGGGGCACATCTTCAAGATTTAGATGCCGCAGAATATGAAGAGGTTCCTGCTTTATCATTCAACCTCACGAGTGAGAGGGAGCTGAGTAGGAGAAGTTCATTTGCAGACCATGGAGAGGTTTTAGATGGGATCATTACTAGAGGCAGGGGAGAGATTAGACGTACATGTAGTTTGAAAATGACAAGCTCCACTGCAATGCCATCCAAAGATTTCAAAAGTACAAAGAGCTTCTCAGACAGGGTATGCAGCCCTCGGATAACTGAACTGAGAGGGATTCGAAGTCCGCGATTTGGTGGAAGAGGACCATTCAGTCCAAGAACGGGAGAAGCAAGACAGTCCAATTTAGGAAAAAGTGGTCAGAATTCAGATATAAACTAG 2166 0.4391 MEETFVPFRGIKNDLQGRLLCYKQDWTGGLRAGFRILAPTTYIFFASAIPVISFGEQLEKNTDGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMFNFAKDRPDLGPKLFLAWTGWVCVWTSGLLFLLAILGASSIINRFTRIAGELFGLLIAMLFMQEAIKGLIDEFRIPGRESPTLTEFQPSWRFANGMFALVLSFGLFLTALRSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAVSYIPAGSIPKGIPRRLFSPNPWSPGSYENWTIIKDMLNVPVLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVILCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNRLVETARKCIRENSSLGQMYESMQEAYQHMQTPLVYQEPSALCDGQGLKELKDSTIQLASSMGNMEAPIDETLFDIENEIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPFLKKIPTSVLWGYFAFMAVESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIAMFTIFQTAYLLVCFGITWVPIAGVLFPLMIMLLVPVRQYILPKFFKGAHLQDLDAAEYEEVPALSFNLTSERELSRRSSFADHGEVLDGIITRGRGEIRRTCSLKMTSSTAMPSKDFKSTKSFSDRVCSPRITELRGIRSPRFGGRGPFSPRTGEARQSNLGKSGQNSDIN* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0264 721 PANTHER ANION EXCHANGE PROTEIN 2 612 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vvi5g0264 721 Pfam HCO3- transporter family 464 554 IPR011531 GO:0006820|GO:0016020
Vvi5g0264 721 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016020
Vvi5g0264 721 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016020
Vvi5g0264 721 MobiDBLite consensus disorder prediction 703 721 - -
Vvi5g0264 721 FunFam probable boron transporter 2 18 60 - -
Vvi5g0264 721 MobiDBLite consensus disorder prediction 684 721 - -
Vvi5g0264 721 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0264 Vvi-Chr5 2350648 2355416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0264 1 697 Antiporters AT3G62270 77.937 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0264 K24194 - vvi:100252933 1394.79