Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0206 ATGTTGGGTGTTTGTTTATTAATGAAGAAGACTGTTGTGGTCTCTTTGTGGAATGATCATGCTACTAATGTAGGGCAGGAATTGTTGGATAATGCTGATAAATTTCCAATTGTTGCAATTAAATCTCTCAAAGTTGGAGACTTCCAAGTTGTATCACTGTCAACATTGAGTGAAAGTATTGTACTGGTAAATCCAGATACACGCAAATAA 210 0.3524 MLGVCLLMKKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQVVSLSTLSESIVLVNPDTRK* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0206 69 FunFam - 1 69 - -
Vvi5g0206 69 Pfam Replication protein A OB domain 10 64 IPR031657 -
Vvi5g0206 69 SUPERFAMILY Nucleic acid-binding proteins 9 67 IPR012340 -
Vvi5g0206 69 Gene3D - 2 69 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0206 Vvi-Chr5 1771676 1772123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0206 9 67 Core DNA Replication Machinery Family AT5G61000 71.186 4.91e-23 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0206 K07466 - vvi:100255412 112.849