Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi5g0131 | ATGTCTCTGAGACCCAGCGCTAGAACCGAGGTTCGCCGGAACCGGTATAAGGTCGCCGTCGATGCCGAGGAAGGCCGGAGACGGAGGGAAGACAACATGGTTGAGATCCGTAAGAGCAAACGCGAGGAGAGCTTGCAGAAGAAGCGTCGTGAAGGTCTCCAGGCTCAGCAGTTCCCTGCCGCTGCTCACGCTTCCACTGTCGAAAAAAAGTTAGAGAGTCTTCCTTCGATGGTTGCTGGGGTTTGGTCGGATAATAGCAGTTTGCAGCTGGAGGCCACTACTCAGTTCCGGAAACTGCTTTCTATTGAACGTAGTCCGCCAATTGAGGAAGTTATTCAATCTGGGGTGGTTCCTCGCTTTGTGGAATTTCTTGTTAGGGAGGATTTCCCACAGCTTCAGTTTGAGGCAGCTTGGGCTCTCACAAACATTGCTTCTGGGACATCAGAAAATACCAAGGTGGTAATTGATCATGGAGCAGTGCCAATATTTGTGAAGCTACTTGGTTCTCCAAGTGATGATGTTCGGGAGCAGGCTGTCTGGGCTTTGGGAAATGTTGCTGGTGACTCACCCAGATGCCGTGATCTTGTCCTTGGTCATGGGGCCTTGATTCCATTGCTAGCACAGTTGAATGAGCATGCCAAACTTTCAATGCTAAGAAATGCCACATGGACTCTATCAAACTTCTGCAGAGGCAAGCCTCAGCCACCATTTGATCAGGTGAAGCCGGCACTTCCAGCCCTGGAGCGTCTTGTTCATTCCAGCGATGAAGAAGTTCTGACAGATGCATGTTGGGCACTCTCATATCTCTCTGATGGTACAAATGACAAAATTCAAGCAGTGATCGAGGCAGGTGTCTGCCCCAGACTTGTTGAGCTCCTCCTTCATCCATCTCCATCAGTGCTCATTCCTGCCCTTCGCACAGTTGGAAACATTGTGACAGGAGACGATATCCAGACTCAGTCTATAATTAATCATGGTGCACTTCCGTGCCTTCTGAGCCTGTTGACCCATAATCATAAAAAGAGCATCAAGAAAGAAGCTTGCTGGACTATTTCAAATATTACAGCTGGAAACAAGGAACAGATCCAGGCTGTTATCGAGGCTGGTGTAATTGCCCCCTTGGTTCATTTGCTTCAAACTGCCGAGTTTGATATAAAGAAAGAGGCAGCATGGGCAATATCGAATGCTACTTCTGGTGGCACTCATGAACAAATCAAGTACCTGGTGAGTCAAGGGTGCATAAAGCCATTGTGTGACCTCCTTGTATGCCCTGATCCAAGGATTGTGACTGTCTGTTTGGAAGGACTAGAGAACATACTGAAGGTTGGGGAAGCTGAGAAGACTCTAGGCAACAGTGGAGATGTTAATTATTATGCCCAATTGATAGACGATGCTGAAGGGTTAGAAAAGATTGAGAATCTTCAGAGTCATGATAACAATGAGATTTATGAAAAGGCAGTGAAGATTCTTGAGACATATTGGTTGGAGGAGGAGGATGAAACATTGCCTTCAGGTGATGGTTCCCAGCCTGGTTTCCAATTTGGAGGCAATGATGTTTCAGTTCCATCAGGTGGATTCAACTTTAGCTGA | 1590 | 0.4736 | MSLRPSARTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQAQQFPAAAHASTVEKKLESLPSMVAGVWSDNSSLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVEFLVREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALIPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALERLVHSSDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDIQTQSIINHGALPCLLSLLTHNHKKSIKKEACWTISNITAGNKEQIQAVIEAGVIAPLVHLLQTAEFDIKKEAAWAISNATSGGTHEQIKYLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKTLGNSGDVNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEDETLPSGDGSQPGFQFGGNDVSVPSGGFNFS* | 530 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi5g0131 | 529 | MobiDBLite | consensus disorder prediction | 22 | 56 | - | - | |
Vvi5g0131 | 529 | PANTHER | IMPORTIN ALPHA | 12 | 500 | - | - | |
Vvi5g0131 | 529 | SUPERFAMILY | ARM repeat | 13 | 499 | IPR016024 | - | |
Vvi5g0131 | 529 | SMART | arm_5 | 315 | 356 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | SMART | arm_5 | 358 | 398 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | SMART | arm_5 | 232 | 271 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | SMART | arm_5 | 273 | 313 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | SMART | arm_5 | 147 | 187 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | SMART | arm_5 | 401 | 441 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | SMART | arm_5 | 104 | 145 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | SMART | arm_5 | 188 | 230 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | Pfam | Atypical Arm repeat | 456 | 500 | IPR032413 | - | |
Vvi5g0131 | 529 | ProSiteProfiles | IBB domain profile. | 1 | 58 | IPR002652 | GO:0006606|GO:0061608 | |
Vvi5g0131 | 529 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 369 | 397 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 242 | 284 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | MobiDBLite | consensus disorder prediction | 506 | 529 | - | - | |
Vvi5g0131 | 529 | Gene3D | - | 11 | 50 | IPR036975 | GO:0006606 | |
Vvi5g0131 | 529 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 326 | 369 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | FunFam | Importin subunit alpha | 11 | 50 | - | - | |
Vvi5g0131 | 529 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 158 | 200 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | PIRSF | Importin_alpha | 2 | 528 | IPR024931 | GO:0005737|GO:0006606|GO:0061608 | |
Vvi5g0131 | 529 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 115 | 158 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | MobiDBLite | consensus disorder prediction | 22 | 50 | - | - | |
Vvi5g0131 | 529 | Pfam | Importin beta binding domain | 12 | 94 | IPR002652 | GO:0006606|GO:0061608 | |
Vvi5g0131 | 529 | Gene3D | - | 72 | 495 | IPR011989 | - | |
Vvi5g0131 | 529 | MobiDBLite | consensus disorder prediction | 499 | 529 | - | - | |
Vvi5g0131 | 529 | Pfam | Armadillo/beta-catenin-like repeat | 105 | 145 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | Pfam | Armadillo/beta-catenin-like repeat | 243 | 270 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | Pfam | Armadillo/beta-catenin-like repeat | 147 | 186 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | Pfam | Armadillo/beta-catenin-like repeat | 402 | 439 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | Pfam | Armadillo/beta-catenin-like repeat | 274 | 312 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | Pfam | Armadillo/beta-catenin-like repeat | 318 | 356 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | Pfam | Armadillo/beta-catenin-like repeat | 189 | 230 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | Pfam | Armadillo/beta-catenin-like repeat | 358 | 397 | IPR000225 | GO:0005515 | |
Vvi5g0131 | 529 | FunFam | Importin subunit alpha | 72 | 495 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi5g0131 | Vvi-Chr5 | 1149167 | 1153335 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi5g0131 | 322 | 468 | U-box Gene Family | AT2G23140 | 29.730 | 1.59e-07 | 52.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi5g0131 | K15042 | - | vvi:100248248 | 1053.51 |