Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0125 ATGAGGGCTGAGAAACAAGGTTCAAAAAGTGGAGGTTATGTTGGTGGTTTTTTTCAGCTGTTCGACTGGAATGCCAAATCAAGAAAGAAGTTGTTCTCTAATAAGTCTGATTTACCAGAGAGATCCAAACAAGGAAAGAAAAGTGATGGGAATTTGCCAATGACACGGTTTCGTCTGACAGATGATGATGAAGCTGGAGCAACACCAAGTTTCAAAGGAAGTAGTGATTATAGTTGTGGTTCATCAGTAACTGATGAGGAAGGGTACGGAACAAGGGCTCCCGGAGTTGTAGCCAGGCTAATGGGATTAGATTCCCTGCCCCCATCCAATATTTCAGAGCCATACTCTTCCCCATTCTTTGACTCCCAATCTCTCCGAGATGTTCATTACAACAGGAAAAACTTTGATTTTCATCATGATCATCAAATCATGCATTCTGGCAATCTGCTCAACAGGGTGGATGGCCCATCTAGAAGTGCCATGGATTTAAAGCCTCCAAAGACACTAAGCAGACCAATTGAGAAGTTCCAAACTGAAATTCTGCCTCCTAAGTCAGCTAAATCAATTCCAAGCACGCATCATAAACTTTTATCTCCTATTAAGAGTCCTGGCTTCATTCCAACTAAGAATGCAGCTCATATAATGGAAGCAGCTGCTAAAATTATTGAGCCAGGACCTCAAGCCACTACTAAGGCCAAAATGCCCCTTGTAGGTTCTCCTTTGGTGCCCTTGAAAGTTCGAGATCTGAAAGAGAGAATGGAAGCTGCTCAGAAAATGCCTCTGGTTGGGTCTTCTTCAGTACCTTCGAAAGTGAAAAATCTAAAAGAGAAAGCGGATGCTGCTCAGAAACTATCAAGGCGTGCTGAAACTTCTCGAAGACCAGTTGAGTCTAGTGCTGCTAAGTATCTCAAAGGTCAGTCTTTGAACAAGAGCTGGAATGGATCAGAAGAGACAACATCATTCAGGGGTTCTTCTGATACAGAAGAAAGTTCTGCTGGTTTAAAGAATAAAGGAAAATCCATTTCCCTTGCAATCCAAGCAAAGGTCAATGTTCAGAGGAGAGAAGGTCTAAATCCAAGTACCAATAGAAGTTCAGTAGGTCTGAGAGAACAGAATGAGGTTAAATCAAGCCAGCCATTCAAGAGCCAATCAAATACCCAAAAAGGTGTGCATAAGAAACCTTCTACACCTAATGCTCCAGGTGTGCTCAGACAGAATAATCAGAAACAAAATTGCATGGTGGATAAAGACAAGTTACCATCAAAGTCCTTTGTTTCTACCTCACAAAGCAGGAAACCCTTGTCTGGGGAATCCTCTTTGGGGCGTCACAAAACCTCAAGTAAAGTTTCTGGGAACTCCAAAGCTGGATCCAGGAAGTTGGGCTTAGAGCCAACTGATAGTGAAAAGGAAGTCTCATATTCAAGTACAAAGAATTTCCCTCGGAAGAAGCGATCTATAAATGGGGATTTTAATCTTGAGAACAATTGGGTTGCTGATAATTTCTTGATTGACAAAAATGAGAAAGCATTTCAGTCTAATACAGTGAAAGAAAGGCACTTTAGTTGGGCAGAAGATAGCAGAAAGAAAGGCATGGATGTTGTTTCTTTTACATTCACAGCTCCACTGACACGATCTATCCCTGGTTCCGAGTCCCCTAGCCAGGCGGCAATGAAAAGTAATGGTCTTTCAACAGATTATCGAGGTAAAAAAGTGCTGCTTGAACCAGATGCTAAAAACTTATCTTCACTTGGAATTAATGTGATAGGCGGTGATGCTTTGAGTATGCTTTTGGACCAAAAACTAAGGGAATTGACCGATGGGGTTGATTCTTCCCGGCGTGAATCTTTCAAAGTAGGGTCAACTGCTAGTTCTTCTATTCTTCAAGATCTGGCACCTACTCTTAATGCACTAAGCACCACACATAGGTTGCATGACAAGAGGGACCAACCTTGGCTTCAGAAAGATAAAATGGATAGCCTATATGACTCTGACTTCTCTTTTACTGCTCCTTCGGCATTTGACATAAAGCATAAACTTCAGGGAGAGAATGAGATGGATGAGTGCAGCAGCAGCAGCAATGCTGAAGCCAGAAACTTGCTTGATTGTCGACATCCTAGTCCAGTTTCTATTCTTGAACCTTCTTTTTCAACTGAAAGTTGCAACTCTTCAGACAGCACAGACAGTAATAGCATAGAAGGAAGCAAGCACTTCTCATCTGTTCTAGCCCAGGAATTGATTAGTTTGAGCTTTTCAAAGAAGTTCAATTCAATGGAAGCCGATGCAGAGCTATCAGATTCAGCTTCTTCCACATCTACTGCAACTGTGGCTACAAAGCATGTGGTGGCATTAACTGCAACATGTTTGGTGAGATCTACCAAGTGGGAACTAGAATATGTGAAGGAGATACTCTGTAACATTGAATTGATGTTCAAGGATTTTGCATTGGGTCGTGCCCGTGAGATCATAAATCCTCATCTTTTCCATCAGTTGGAGAATCGAAAAGGAGGCTTGGAAATTGATGGAGATGAGTCTAGGCTAAATAGGAAGGTGTTATTTGATTGTGTGAGCGAATGCTTAGACTTAAGATGTAGGCGGTATGTTGGTGGGGGATGCAAAACATGGGCAAAAGGGGTGACAATGGTAAGAAGAAAGGAGTGGTTATCAGAGGAAGTGTACAAGGAGATCTCAGGATGGAGAAGCATGGGGGACTGTATGGTGGATGAGCTTGTAGACAAGGACATGAGCAGCCAGTATGGAAGATGGCTTGACTTTGAAGTCGAAACATTTGAACTTGGAGTGGAGATTGAGAGCCTGCTATTTACTTCTTTGGTTGATGAAATTGTTGCTGATATCTTGCTATTTTAG 2865 0.4209 MRAEKQGSKSGGYVGGFFQLFDWNAKSRKKLFSNKSDLPERSKQGKKSDGNLPMTRFRLTDDDEAGATPSFKGSSDYSCGSSVTDEEGYGTRAPGVVARLMGLDSLPPSNISEPYSSPFFDSQSLRDVHYNRKNFDFHHDHQIMHSGNLLNRVDGPSRSAMDLKPPKTLSRPIEKFQTEILPPKSAKSIPSTHHKLLSPIKSPGFIPTKNAAHIMEAAAKIIEPGPQATTKAKMPLVGSPLVPLKVRDLKERMEAAQKMPLVGSSSVPSKVKNLKEKADAAQKLSRRAETSRRPVESSAAKYLKGQSLNKSWNGSEETTSFRGSSDTEESSAGLKNKGKSISLAIQAKVNVQRREGLNPSTNRSSVGLREQNEVKSSQPFKSQSNTQKGVHKKPSTPNAPGVLRQNNQKQNCMVDKDKLPSKSFVSTSQSRKPLSGESSLGRHKTSSKVSGNSKAGSRKLGLEPTDSEKEVSYSSTKNFPRKKRSINGDFNLENNWVADNFLIDKNEKAFQSNTVKERHFSWAEDSRKKGMDVVSFTFTAPLTRSIPGSESPSQAAMKSNGLSTDYRGKKVLLEPDAKNLSSLGINVIGGDALSMLLDQKLRELTDGVDSSRRESFKVGSTASSSILQDLAPTLNALSTTHRLHDKRDQPWLQKDKMDSLYDSDFSFTAPSAFDIKHKLQGENEMDECSSSSNAEARNLLDCRHPSPVSILEPSFSTESCNSSDSTDSNSIEGSKHFSSVLAQELISLSFSKKFNSMEADAELSDSASSTSTATVATKHVVALTATCLVRSTKWELEYVKEILCNIELMFKDFALGRAREIINPHLFHQLENRKGGLEIDGDESRLNRKVLFDCVSECLDLRCRRYVGGGCKTWAKGVTMVRRKEWLSEEVYKEISGWRSMGDCMVDELVDKDMSSQYGRWLDFEVETFELGVEIESLLFTSLVDEIVADILLF* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0125 954 MobiDBLite consensus disorder prediction 32 47 - -
Vvi5g0125 954 Pfam Domain of unknown function (DUF4378) 795 946 IPR025486 -
Vvi5g0125 954 Coils Coil 271 291 - -
Vvi5g0125 954 MobiDBLite consensus disorder prediction 302 336 - -
Vvi5g0125 954 MobiDBLite consensus disorder prediction 71 85 - -
Vvi5g0125 954 MobiDBLite consensus disorder prediction 32 90 - -
Vvi5g0125 954 MobiDBLite consensus disorder prediction 257 336 - -
Vvi5g0125 954 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 4 950 - -
Vvi5g0125 954 MobiDBLite consensus disorder prediction 352 414 - -
Vvi5g0125 954 MobiDBLite consensus disorder prediction 352 485 - -
Vvi5g0125 954 MobiDBLite consensus disorder prediction 272 294 - -
Vvi5g0125 954 MobiDBLite consensus disorder prediction 421 454 - -
Vvi5g0125 954 Pfam DUF761-associated sequence motif 81 112 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0125 Vvi-Chr5 1116215 1121011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0125 15 952 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 34.205 3.18e-117 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0125 - - vri:117910395 1823.52