Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0091 ATGGCAAGGATAAAACCTCAGGCTTTGTTACTGCAAAGCAAAAAGAAGAAGGGCCCGACACGTATCAGTATCACTACAATTATATTTTGCAACCTAGTCGTTGTGTTGGTTGTATTTTCCCTATTTGCTACTTATAGGCATTGGTCTAATAGGTCGAGGAACCAGTTTCAGAGTGGGGTATCAAATGTTGAGGAGAATGATGGTTTTGTAGATTCAAAAAGGTTCGACCTTCCCGGATATGCTATCCTAAATACATCAAAAGGTTATATAACTGTGGAGCTTTACAAGGATGGTTCTCCTGAGATTGTGGACAAATTCCTTGACTTGTGTCAAAAGGGTTACTTCAAAGGGATGCCTTTCCATCACGTGATAAAGAACTATGTGATTCAAGGAGGTCATTCCCAAGGAATTGGAGCTGCTGAAGATTGGACATCAAAAGGGAAGCCTCATGGACACCTTCCTTTAAGTCCTAAGCATGAGGCATTTATGCTTGGAACTTCAAAGACTAAACAAGATCGCAAGAAATTTGAGCTGTTTATCACTACTGCACCAATACCAGATCTGAATGACAAGCTTATTGTATTTGGACGGGTCATCAAGGGGGAGGACGTTGTGCAGGAAATTGAAGAGGTGGATACAGATGAACACTACCGACCTAAATCTCGTATAGGGATCATCAACGTGACTCTCAAACGTGAAGCTTGA 705 0.4142 MARIKPQALLLQSKKKKGPTRISITTIIFCNLVVVLVVFSLFATYRHWSNRSRNQFQSGVSNVEENDGFVDSKRFDLPGYAILNTSKGYITVELYKDGSPEIVDKFLDLCQKGYFKGMPFHHVIKNYVIQGGHSQGIGAAEDWTSKGKPHGHLPLSPKHEAFMLGTSKTKQDRKKFELFITTAPIPDLNDKLIVFGRVIKGEDVVQEIEEVDTDEHYRPKSRIGIINVTLKREA* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0091 234 Gene3D - 71 234 IPR029000 -
Vvi5g0091 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 190 205 IPR002130 GO:0000413|GO:0003755
Vvi5g0091 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Vvi5g0091 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 177 189 IPR002130 GO:0000413|GO:0003755
Vvi5g0091 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Vvi5g0091 234 CDD cyclophilin 82 227 - -
Vvi5g0091 234 SUPERFAMILY Cyclophilin-like 77 230 IPR029000 -
Vvi5g0091 234 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 230 IPR002130 GO:0000413|GO:0003755
Vvi5g0091 234 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 234 - -
Vvi5g0091 234 FunFam Peptidyl-prolyl cis-trans isomerase 69 234 - -
Vvi5g0091 234 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 229 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0091 Vvi-Chr5 804258 807293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0091 79 230 U-box Gene Family AT5G67530 31.410 1.02e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0091 - - vvi:100244755 458.759