Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi5g0084 | ATGAATCTTGATTCCCATGTGTTGTTTTGTCTCGTTTTCTTCTCTTTCGTCGTCAACCCCGTTCATGTACTGAGCGGCAGCTCTGAATCGGACTCTGTTTCGTTTATCTTGAGTTGTGGGGATTCCAGCGGTGGCGCTGATGCTGATGGGCGGAAGTGGGTTCCGGACACTAAGTTTCTGGCCTCCCCAGGGAAATCCATTTCGGCCACAGCACAACTCCAAGACCCTTCGCTGCCTTCTCCCGTTCCTTACATGTCTGCTAGGATTTTCACATCAGAATCCACCTACCAATTCTCAGTTTCTCCTAAGAATCGCCTCTGGGTCAGACTCCATTTTTACCCATCTTTTTACAGTGCTCTCAATGCTTCCGACAGCTTTTTCTCGGTCACTGCCGGTGGCTTCACCCTCCTTAACAATTTCAGTGCCTCCACCACAGCCCAAGCTCTCACACAGGCTTATATCATCAAAGACTTCTCTCTCATGCCCCCGGAATCTGGCCATCTCAATATCACATTCAAGCCTTCTCCAAATCACAATGGATCGTATGCTTTTATCAATGGGATTGAAGTAATTTCCATGCCGGATATATTTGGATCCGCAACTATGGTTGGGTACTCCGACTTGGATGCTGCCGGCTCTTCATTGCAGACCATGTATCGGTTGAATGTTGGTGGACAGTACATTGCAGCCAATAATGACTCTGGGCTAAGCCGGACATGGTATGATGATTCCCCATATCTGTATGGGGCTGCCTTTGGGGTCACTTCTGAAGCTGATAGCAATGTTACCATTCAATATCCTTCGCATGTGCCTGAGTATATTGCCCCAGTTGATGTGTACAGAACAGCAAGAACAATGGGTCCAGACCCAAAGATCAATCAGAATTATAATCTGACATGGGTGTTTCAGGTTGATGCCAATTTCACATACATTGTCAGGTTTCATTTCTGTGAGTTTCTGCTTTCCAAGATCAACCAGAGGGTGTTTGATATTTATGTTAACAACCAAACAGCACAGCCAGCTGCTGATTTGATTGCTTGGGCTGAATCAGAGGGAGTGCCGGTTTACAAGGATTTTGCTGTATTTGTTAAAGATGAACCTGGTGATGAACAACTATGGGTGGCATTACACCCATCTGTATCAATGAAGCCTGAATTCTATGATGCAATTCTCAATGGATTGGAGATCTTTAAGCTTAACGACTCAAATGGGAATTTAGCAGGTCCAAATCCTGTGCCATCACCCATGCTGGTTAAGGCTGAGGAGACGAGGAATTTCGCCTCACCAGAGTCTAGTGACAATGCTCAAGTCATAGGTGGGATTGCTGGAGGAGCTGCAGGGTTGGTGGTGGTTGTTGCAGTTGTTGCTGTTATAGCTTTCCGAAGGAAGAAAATGCTTGACAGAAGTGGTTCCAGGACAAGTGGGTGGTTGCCAGTTCATGGCAGCTCTGGCACAACAGCAAGCAAGTCTACTATCTCAGGCAAGAGCACTGCCAGTAGCCACTTGTCTTCCATGGCGGCAGCTCTTTGTCGGCATTTCACGTTGGCAGAAATGAGGCATGGCACCAAGAACTTTGACGAGTCACAGGTAATTGGGGTTGGAGGATTTGGGAAGGTTTATAAAGGGGTTGTGGATGGGAGCACAAAAGTTGCAATTAAAAGATCAAACCCTTCTTCAGAGCAAGGTGTTCATGAGTTCCAGACTGAAATTGAGATGCTTTCAAAGCTGAGACATAGGCATTTAGTCTCTCTTATTGGTTATTGTGAAGAAGATAATGAGATGATTCTGGTTTATGATTACATGGCCAATGGGACTCTGAGGGAGCATCTTTATAAGAGCGATAAACCTCAATTGTCATGGAAGCAGAGGTTGGAAATTTGTATTGGAGCTGCCAGGGGACTTCACTATCTTCACACTGGGGCCAAGTACACTATCATTCACAGGGATGTGAAGACTACGAACATTCTTCTGGATGAGAAGTGGGTAGCAAAAGTTTCAGATTTTGGGCTCTCAAAAACAGGCCCTGAACTCAATCAAACTCATGTTAGTACAGTGGTTAAGGGCAGCTTTGGGTACTTGGATCCTGAGTACTTCCGGAGACAACAATTGACAGAAAAATCTGATGTTTACTCCTTTGGGGTAGTACTTTTTGAGGCATTGTGTGCAAGGCCAGCCCTCAATCCCAGCCTTCCTAAGGAACAAGTTAGTCTTGCAGATTGGGCGCTACAATGCCAAAAGAAGGGAATTCTCGAGGAAATCATCGATCCCCATCTTAAGGGAAATATCACTCCTGAGTGCTTGATGAAATTTGCAGAGACTGCCGAGAAGTGCCTGTCTGATCATGGCCTTGAGCGACCTTCAATGGGCGACGTACTCTGGAACCTTGAGTTTGCCCTCCAATTGCAGGAGAAACCCCAAGGAGCAAAAATTGATGTAGAGAAGGTGAATGCCGACATCAATGCAATGCATAGAAGCATGTTGAGCATTGATGAGGAGAGTGCAGTTAGTGAGGATACTGAGGACTTAAGCACAAGTGAAGTGTTCTCACACATGGTGAACCCAAAAGGGAGATGA | 2574 | 0.4588 | MNLDSHVLFCLVFFSFVVNPVHVLSGSSESDSVSFILSCGDSSGGADADGRKWVPDTKFLASPGKSISATAQLQDPSLPSPVPYMSARIFTSESTYQFSVSPKNRLWVRLHFYPSFYSALNASDSFFSVTAGGFTLLNNFSASTTAQALTQAYIIKDFSLMPPESGHLNITFKPSPNHNGSYAFINGIEVISMPDIFGSATMVGYSDLDAAGSSLQTMYRLNVGGQYIAANNDSGLSRTWYDDSPYLYGAAFGVTSEADSNVTIQYPSHVPEYIAPVDVYRTARTMGPDPKINQNYNLTWVFQVDANFTYIVRFHFCEFLLSKINQRVFDIYVNNQTAQPAADLIAWAESEGVPVYKDFAVFVKDEPGDEQLWVALHPSVSMKPEFYDAILNGLEIFKLNDSNGNLAGPNPVPSPMLVKAEETRNFASPESSDNAQVIGGIAGGAAGLVVVVAVVAVIAFRRKKMLDRSGSRTSGWLPVHGSSGTTASKSTISGKSTASSHLSSMAAALCRHFTLAEMRHGTKNFDESQVIGVGGFGKVYKGVVDGSTKVAIKRSNPSSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEEDNEMILVYDYMANGTLREHLYKSDKPQLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPELNQTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLPKEQVSLADWALQCQKKGILEEIIDPHLKGNITPECLMKFAETAEKCLSDHGLERPSMGDVLWNLEFALQLQEKPQGAKIDVEKVNADINAMHRSMLSIDEESAVSEDTEDLSTSEVFSHMVNPKGR* | 858 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi5g0084 | 857 | SUPERFAMILY | Protein kinase-like (PK-like) | 499 | 798 | IPR011009 | - | |
Vvi5g0084 | 857 | SMART | serkin_6 | 525 | 798 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi5g0084 | 857 | CDD | STKc_IRAK | 531 | 796 | - | - | |
Vvi5g0084 | 857 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 645 | 657 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi5g0084 | 857 | FunFam | FERONIA receptor-like kinase | 34 | 194 | - | - | |
Vvi5g0084 | 857 | FunFam | FERONIA receptor-like kinase | 213 | 400 | - | - | |
Vvi5g0084 | 857 | FunFam | Receptor-like protein kinase FERONIA | 601 | 814 | - | - | |
Vvi5g0084 | 857 | Pfam | Malectin-like domain | 37 | 398 | IPR024788 | - | |
Vvi5g0084 | 857 | Gene3D | Transferase(Phosphotransferase) domain 1 | 601 | 821 | - | - | |
Vvi5g0084 | 857 | Pfam | Protein tyrosine and serine/threonine kinase | 528 | 792 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi5g0084 | 857 | ProSitePatterns | Protein kinases ATP-binding region signature. | 531 | 553 | IPR017441 | GO:0005524 | |
Vvi5g0084 | 857 | PANTHER | OS03G0124300 PROTEIN-RELATED | 9 | 465 | IPR046957 | GO:0004672 | |
Vvi5g0084 | 857 | MobiDBLite | consensus disorder prediction | 475 | 495 | - | - | |
Vvi5g0084 | 857 | Gene3D | - | 30 | 193 | - | - | |
Vvi5g0084 | 857 | Gene3D | - | 214 | 400 | - | - | |
Vvi5g0084 | 857 | ProSiteProfiles | Protein kinase domain profile. | 525 | 798 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi5g0084 | 857 | Gene3D | Phosphorylase Kinase; domain 1 | 484 | 600 | - | - | |
Vvi5g0084 | 857 | FunFam | receptor-like protein kinase FERONIA | 487 | 600 | - | - | |
Vvi5g0084 | 857 | MobiDBLite | consensus disorder prediction | 471 | 495 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi5g0084 | Vvi-Chr5 | 749324 | 751897 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi5g0084 | 18 | 857 | Receptor kinase-like Gene Family | AT3G51550 | 57.705 | 0.0 | 979 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Vvi5g0084 | Malectin_like | 5.4e-41 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi5g0084 | - | - | vvi:100260108 | 1628.22 |