Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0071 ATGCTCGGTGCTTTGATGAATCTCCTCTCTCTCTGTTTGAAGCCATTTGGCCGTGATTCAGGGAATGTCGAGCTTGGGAGTGAAGGAAGAGAGGGTTTGCTTTGGTTTCGGGATATTGGGCATTATGCGTCCGGCGACTTCTCGATGGCCGTGGTTCAGGCCAATCAGGTGCTGGAGGACCAGAGCCAGATCGAGTCGGGGCCATTTGGGACCTTCGTGGGGGTTTACGACGGTCACGGAGGGCCCGAAGCGGCTCGCTACGTGTGCGATCACCTTTTTCGGAATTTCCAAGCAATATCAGCTGAGTCCGAGGGTGTTGTGACCACGGAGACAATCAGAAGGGCTTTTCTCCAAACAGAGGAAGGGTTTACAGCTCTTGTGTCCCAGTTATGGATTAGTCAACCCAATCTGGCGTCAGTTGGCTCATGCTGTCTAGTGGGAGTTATATACGAGCAGACCCTTTTCATTGCAAACCTGGGAGATTCGCGGGTTGTGTTGGGCAAGAAAGTAGGCAACACTGGTGTTGTTGCTGCCATACAGCTCTCGACTGAACACAATGCTAACGTTGAGGCTGTCAGGCAAGAGCTCAAAGACTTGCACCCCAATGATCCCCAAATTGTTGTCCTCAAGCATGGTGTTTGGAGAGTAAAGGGCATTATTCAGGTTTCTAGATCTATAGGCGACGTATATATGAAACATGCGCAGTTTAACAGAGAACCACTTAATGCGAAATTCAGACTTCCTGAACCAATGAACATGCCTATCTTGACTGCCAATCCATCTATTATTTCTCATACTCTCCACCCAAATGATTCTTTCCTTATATTTGCATCTGATGGTCTATGGGAACACTTGAGTAATGAAAAAGCTGTGGATATCGTCCATAGTCATCCACGTGCAGGAAGTGCCAAACGACTTGTAAAGGCAGCCCTCCAAGAAGCAGCAAGAAAACGAGAAATGCGGTACTCAGATCTGCGAAGGATTGACAAGAAGGTCAGACGACATTTTCATGACGACATAACTGTTATTGTTTTGTTCTTAAACCACGACCTAATATCCAGAGGCATGGTGCAAGACCCTCCACTTTCAGTTCGTAGTGCACTGGAACACTGA 1113 0.478 MLGALMNLLSLCLKPFGRDSGNVELGSEGREGLLWFRDIGHYASGDFSMAVVQANQVLEDQSQIESGPFGTFVGVYDGHGGPEAARYVCDHLFRNFQAISAESEGVVTTETIRRAFLQTEEGFTALVSQLWISQPNLASVGSCCLVGVIYEQTLFIANLGDSRVVLGKKVGNTGVVAAIQLSTEHNANVEAVRQELKDLHPNDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPLNAKFRLPEPMNMPILTANPSIISHTLHPNDSFLIFASDGLWEHLSNEKAVDIVHSHPRAGSAKRLVKAALQEAARKREMRYSDLRRIDKKVRRHFHDDITVIVLFLNHDLISRGMVQDPPLSVRSALEH* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0071 370 FunFam Probable protein phosphatase 2C 42 37 355 - -
Vvi5g0071 370 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Vvi5g0071 370 CDD PP2Cc 47 347 IPR001932 -
Vvi5g0071 370 SUPERFAMILY PP2C-like 55 348 IPR036457 -
Vvi5g0071 370 Gene3D - 39 357 IPR036457 -
Vvi5g0071 370 Pfam Protein phosphatase 2C 71 317 IPR001932 -
Vvi5g0071 370 SMART PP2C_4 38 345 IPR001932 -
Vvi5g0071 370 ProSiteProfiles PPM-type phosphatase domain profile. 46 347 IPR001932 -
Vvi5g0071 370 PANTHER PROTEIN PHOSPHATASE 44 345 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0071 Vvi-Chr5 648362 652864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0071 1 367 PP2C-type Phosphatase Gene Family AT4G38520 60.477 3.85e-165 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0071 K01102 - vvi:100241379 740.725