Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0057 ATGGCTGCTTCACTGCTGCGTCTGCATTTCCATGACTGCTTTGTCAATGCAATTTTGCAGGGTTGTGATGCCTCTGTTTTGTTGGATGATGTTGGGAGTTTTGTCGGGGAAAAAACTGCAGCCCCGAACTTGAACTCACTGAGAGGGTTTGAAGTGATCGATGAGATAAAATCAGTGCTTGAATCTGTATGCCCTAGAACTGTCTCTTGTGCAGACATTCTTGCTATAACAGCTAGAGACTCTGTTGTTCTGTCAGGCGGGCTAGGTTGGGATGTCCAGAAAGGAAGGAGGGATAGCTTGAGTGCTAGCAAAGCAGCAGCCAACAACAACATCCCTGGCCCGAATTCTAGCGTTGCAACACTCGTGGCCAAGTTCCAGAGCGTTGGCCTCACGCTCAACGACATGGTGGCCCTCTCAGGGGCGCACACAATGGGGAAAGCAAGATGCTCGACATTCACCTCAAGGCTAACTGGGAGCAGCAACTCAAACGGTCCGGAAATTAACATGAAATTCATGGAGTCACTGCAGCAGCTATGCTCAGAATCTGGCACCAACGTGACGCTAGCACAACTTGACCTTGTGACGCCTGCGACATTTGATAACCAGTACTATGTCAACCTTCTATCTGGTGAGGGACTGCTTGCATCCGACCAGGCACTTGTGTCCGGAGATGATCAGACACGACGAATTGTAGAATCCTATGTGGAGGACACAATGATCTTCTTTGAGGATTTCAGGAAATCCATGTTGAAGATGGGAAGTTTGGGGCCATTGACTGGTAATAACGGTGAGATCCGGAGGAACTGTAGGGCTGTTAATTAG 822 0.4891 MAASLLRLHFHDCFVNAILQGCDASVLLDDVGSFVGEKTAAPNLNSLRGFEVIDEIKSVLESVCPRTVSCADILAITARDSVVLSGGLGWDVQKGRRDSLSASKAAANNNIPGPNSSVATLVAKFQSVGLTLNDMVALSGAHTMGKARCSTFTSRLTGSSNSNGPEINMKFMESLQQLCSESGTNVTLAQLDLVTPATFDNQYYVNLLSGEGLLASDQALVSGDDQTRRIVESYVEDTMIFFEDFRKSMLKMGSLGPLTGNNGEIRRNCRAVN* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0057 273 PRINTS Haem peroxidase superfamily signature 68 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 PRINTS Haem peroxidase superfamily signature 86 98 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 PRINTS Haem peroxidase superfamily signature 134 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 PRINTS Plant peroxidase signature 67 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 PRINTS Plant peroxidase signature 206 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 PRINTS Plant peroxidase signature 86 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 PRINTS Plant peroxidase signature 48 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 PRINTS Plant peroxidase signature 133 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 PRINTS Plant peroxidase signature 247 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 PRINTS Plant peroxidase signature 190 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 SUPERFAMILY Heme-dependent peroxidases 1 273 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 FunFam Peroxidase 112 252 - -
Vvi5g0057 273 Pfam Peroxidase 1 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 Gene3D Peroxidase, domain 2 112 253 - -
Vvi5g0057 273 CDD secretory_peroxidase 1 272 IPR033905 GO:0004601|GO:0042744
Vvi5g0057 273 ProSiteProfiles Plant heme peroxidase family profile. 1 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 Gene3D - 1 273 - -
Vvi5g0057 273 PANTHER PEROXIDASE 72-RELATED 1 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g0057 273 ProSitePatterns Peroxidases proximal heme-ligand signature. 134 144 IPR019793 -
Vvi5g0057 273 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0057 Vvi-Chr5 524228 525260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0057 1 273 Peroxidase AT4G16270 66.065 1.12e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0057 K00430 - vvi:100249955 518.85