Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0019 ATGGCTTCTGGTTCGGAGGAGGGATCAGGGTTTCCGGCCGACGATTATGAGTCGTTGATAGCGACGACCGATGTGGAGCTGTTGAAGAGGGCGTGGAGGAACGAGAAGGCTGCTCCCGAGACTCTCCATTTTCAAACTAGAGAACAGATCCAGTTGATGTTCCGGAGCCACGGTTGGACACCTTTATCTTCTGCAAAAGCAAAGGATCTATCGAAGCTTTCCAGCTTGATGACAGCAAAGAAGTGGTGGACCTGGTTGCTGATGATTTATACATTCTTCGTTACAACTCAGTAA 294 0.4898 MASGSEEGSGFPADDYESLIATTDVELLKRAWRNEKAAPETLHFQTREQIQLMFRSHGWTPLSSAKAKDLSKLSSLMTAKKWWTWLLMIYTFFVTTQ* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0019 97 Gene3D - 12 90 - -
Vvi5g0019 97 SUPERFAMILY GINS helical bundle-like 21 60 IPR036224 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0019 Vvi-Chr5 168364 169548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0019 1 62 Core DNA Replication Machinery Family AT5G49010 48.649 9.83e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0019 K10735 - vri:117914731 100.908