Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1573 ATGGAAATGGCTTCCTTGCACTATAGGTCTAGTAGAATTCTTCATCTATTTGTTGGTGTTTTTGTTGCACAACTCACCATATCTCTGTCTGCCAAGGTGTATGTAGTTTATATGGGTAGCAGAACTAGCGATGACCCGGATGAAATTCTCAGGCAAAACCACCAAATGCTTACTGCAGTTCATAAAGGAAGTACTGAGCGAGCCCAGGCCTCCCACGTTTATAGTTATAGACATGGTTTCAAAGGCTTTGCGGCGAAGTTGACGGAGCAGCAAGCTTCGGAAATGGCTAATATGCCCGGCGTGGTCTCTGTGTTTCCCAATTTAAAAAGAAGGCTGCACACCACTCATTCGTGGGATTTCATGGGTCTCGTGGGCGAAGAAACCATGGAAATTCCAGGGTATTCCACCAAGAATCAAGAAAATGTTATCATTGGTTTCATTGATACGGGTATATGGCCTGAATCCCCAAGTTTCAGTGATGACAACATGCCTTCAATACCAGCTGGATGGAATGGACAATGCCAATCAGGAGAAGCATTTAATGCATCATCTTGCAACAGGAAAGTGATTGGAGCCAGATATTATTTGAGTGGCTATGAAGCTGAAGAAGATCTGATAACGTCTGTGTCATTCAAATCCCCTAGGGACAGTTCTGGTCATGGCAGCCACACAGCCTCAACAGCTGCAGGCCGGCATGTGACAAACATGAATTATAAGGGCTTGGCAGCCGGAGGTGCTAGGGGAGGTGCTCCGATGGCAAGGATTGCAGTGTACAAGACTTGTTGGGCCTCAGGTTGCTACGATGTGGACTTACTAGCTGCCTTTGATGATGCAATTAGAGATGGCGTTCATATCTTGTCTCTGTCCCTAGGTCCTGAAGCACCTCAGGGAGATTATTTTAATGATGCCATCTCCTTGGGATCATTCCATGCTGCTAGCCATGGGGTAGTGGTAGTTGCTTCAGTTGGAAATGAAGGAAGTCAAGGTTCTGCAACAAACCTTGCTCCATGGATGATCACTGTTGCCGCTAGTTCAACAGATAGGGATTTTACATCTGATATCGTATTAGGAGATGGTGCTAATTTCACGGGTGAAAGTCTGAGTCTGTTTGAAATGAATGCCTCCACAAGCATCATCTCTGCTTCCGAAGCCTATGCAGGATACTTCACTCCCTATCAATCCAGCTACTGTTTGGAGAGTTCCTTGAATAATACCAAGACTAGAGGGAAGATTTTGGTATGCCAACATGCCGAGAGTTCAACAGATTCAAAGCTGGCAAAGAGTGCAGTAGTCAGAGAAGCTGGTGGAGTTGGGATGATTCTTATAGATGAAGCAGATAAGGATGTTGCCATTCCTTTTGTGATCCCTGCAGCTATTGTTGGAAGGGGCACAGGGGGCAGGATTCTATCCTATATTAATCATACACGAAAACCAGTTTCTAGGATTTTCCCAGCAAAGACTGTATTGGGATCTCATCCTGCTCCTCGAGTTGCAGCATTTTCTTCAAAAGGTCCCAATGCCTTAAACCCAGAAATTTTGAAGCCTGGTCTCCAGCAATTGAGAAAATGCATTTCAACATTCTCTCTGGAACTTCTATGGCTTGTCCGCATGTAA 1614 0.4511 MEMASLHYRSSRILHLFVGVFVAQLTISLSAKVYVVYMGSRTSDDPDEILRQNHQMLTAVHKGSTERAQASHVYSYRHGFKGFAAKLTEQQASEMANMPGVVSVFPNLKRRLHTTHSWDFMGLVGEETMEIPGYSTKNQENVIIGFIDTGIWPESPSFSDDNMPSIPAGWNGQCQSGEAFNASSCNRKVIGARYYLSGYEAEEDLITSVSFKSPRDSSGHGSHTASTAAGRHVTNMNYKGLAAGGARGGAPMARIAVYKTCWASGCYDVDLLAAFDDAIRDGVHILSLSLGPEAPQGDYFNDAISLGSFHAASHGVVVVASVGNEGSQGSATNLAPWMITVAASSTDRDFTSDIVLGDGANFTGESLSLFEMNASTSIISASEAYAGYFTPYQSSYCLESSLNNTKTRGKILVCQHAESSTDSKLAKSAVVREAGGVGMILIDEADKDVAIPFVIPAAIVGRGTGGRILSYINHTRKPVSRIFPAKTVLGSHPAPRVAAFSSKGPNALNPEILKPGLQQLRKCISTFSLELLWLVRM* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1573 537 Pfam PA domain 385 465 IPR003137 -
Vvi4g1573 537 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 113 IPR037045 -
Vvi4g1573 537 FunFam subtilisin-like protease SBT1.5 347 489 - -
Vvi4g1573 537 FunFam Subtilisin-like protease SBT5.3 23 113 - -
Vvi4g1573 537 SUPERFAMILY Subtilisin-like 137 518 IPR036852 GO:0004252|GO:0006508
Vvi4g1573 537 Pfam Subtilase family 140 516 IPR000209 GO:0006508|GO:0008236
Vvi4g1573 537 CDD Peptidases_S8_3 112 345 IPR034197 -
Vvi4g1573 537 Gene3D - 347 489 - -
Vvi4g1573 537 CDD PA_subtilisin_like 353 482 - -
Vvi4g1573 537 Gene3D Peptidase S8/S53 domain 141 516 IPR036852 GO:0004252|GO:0006508
Vvi4g1573 537 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 516 IPR045051 -
Vvi4g1573 537 Pfam Peptidase inhibitor I9 33 113 IPR010259 -
Vvi4g1573 537 ProSiteProfiles Serine proteases, subtilase domain profile. 117 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1573 Vvi-Chr4 23760772 23764279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1573 32 517 Subtilisin-like Serine Gene Family AT5G45650 41.300 5.01e-122 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1573 - - vvi:100246533 1000.73