LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi4g1572	ATGGCTCCTCAAACACTCCAATCTCGTCATGAACACAAGCTTCCTGTAGTAGATGATGATACAGATCAAAGGACTGAGCGAGTTCAACGAGCTCAATGGCTCCGAGCTGCCATTCTGGGTGCAAATGATGGCTTGCTCTCTACTACTTCATTGATGCTTGGCATAGGCGCAATTCGACATGATAGATGGTCCATGGTCCTCTCTGGATTGGCTGGAGCTCTTGCTGGCGCCTGCAGCATGGCGGTCGGGGAGTTTGTTTCCGTTTCCATGCAGAGGGATATCGAAGAGGCAACTGTTAGCCAGTGTACTGCAAAGAGCAAGTTATGCAAGCAAGATGATAAAGTCATCAAGCTTGATGTTGTCGCCAGTCCTCCACCGACAGTTGTTGAAACCATGCCTGCTCAGATTAACACAGCCCTGTCACCTGCAGTAACCCCTTCGAAAGGAACACCATGTGCAAAACTAACCTCTGAGCCAGCGGAGAAGGTGTCACCAACCATGACACCTGGAAAGAAGTTGCCTTTTGGTTCGTCTCCTGGGAGGTATCCAATGACGAAAGTGATCATGGAAGATGCCAAGGCAAACACAATGAAAGGAGAGGAGAATAACATCATTGGCAAGGAAACACTGCCAAGCCCATATAAGGCAGCAGCTGCATCAGCCTTGGCATTTTTGTGTGGGTCATTTGTTCCAATAGCATCCGCAATGTTTGCGGCTCACAACACAGTGAGGACTGTGGTGATTGTCGTGGTGGCCTCATTAGCTCTGGCTCTGTTTGGAGGAGTGGGAGCTCAGCTTGGTGGAGCACCAATCAGGGTATCGGCGGTGAGAGTTCTGGTTGGGGGTTGGGTCGCCATGGCAATCACCTATGGGTTGCTCAAGCCTTTTGAGAAAGAAGAATAA	903	0.4983	MAPQTLQSRHEHKLPVVDDDTDQRTERVQRAQWLRAAILGANDGLLSTTSLMLGIGAIRHDRWSMVLSGLAGALAGACSMAVGEFVSVSMQRDIEEATVSQCTAKSKLCKQDDKVIKLDVVASPPPTVVETMPAQINTALSPAVTPSKGTPCAKLTSEPAEKVSPTMTPGKKLPFGSSPGRYPMTKVIMEDAKANTMKGEENNIIGKETLPSPYKAAAASALAFLCGSFVPIASAMFAAHNTVRTVVIVVVASLALALFGGVGAQLGGAPIRVSAVRVLVGGWVAMAITYGLLKPFEKEE*	301

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi4g1572	300	Pfam	VIT family	34	292	IPR008217	GO:0005384\|GO:0030026
	Vvi4g1572	300	PANTHER	FE(2+)/MN(2+) TRANSPORTER PCL1	15	297	IPR008217	GO:0005384\|GO:0030026
	Vvi4g1572	300	MobiDBLite	consensus disorder prediction	1	23	-	-
	Vvi4g1572	300	MobiDBLite	consensus disorder prediction	141	175	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi4g1572	Vvi-Chr4	23755591	23756493	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi4g1572	205	294	Nodulin-like Gene Family	AT1G76800	53.333	2.63e-15	71.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi4g1572	K22736		-	tcc:108661003	286.189