Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1530 ATGGCTGACGTGACGGCTACAGTCAACAGAACAGACGATATGATCGTCTGTTATTCGCCCACCATGATCACCACCAATGGCATTTGGCAGGGTGACAACCCTTTAGATTATTCTCTTCCTCTCTTCATCTTGCAATTAACTTTGGTTGTTGTTACCACTCGCCTCCTGGTTTTCATCTTGAAGCCTCTTCGCCAGCCTCGTGTCATCTCTGAGATCTTGGGTGGTGTATTGTTGGGCCCTTCGGTCCTCGGGCAAAACCTGCATTTGGCCAACCTGATATTCCCCCTTCGAAGTGTGATGGTACTAGAGACAATGGCAAATGTAGGGCTTCTTTACTTCCTCTTTCTGGTTGGGGTAGAAATGGACCTCACAGTAATCCGGAGGACTGGAAAAAAGGCCATTGCCATAGCTATTATTGGCATGATCTTGCCCTTCATCATAGGTTGCGCATTCTCCTTAATTCTTCACCATGAAGATCGCCAAATGAATCGGAGCACTTTTGTGCTCTTCCTTGGGGTTGCTCTCTCCGTCACTGCATTCCCAGTGTTAGCCCGGATTCTCGCAGAGCTCAAACTCATCAACACAGAGCTTGGCAGAATGGCCATGTCGTCTGCTCTAATCAATGACATGTGTGCTTGGGTTCTCTTAGCTGTGGCCATTGCCTTGGCCGAGAATGAGAGTAGTTCATTGGCTTCCCTCTGGGTGATACTATCCAGTGTATTCTTTGTCGTAGTTTGTATTTTCATTGTCAGACCAGTTATCTCCTGGATGATTCGGAGAACTCCAGAGGGGGAATCCTTCAGCGAGTTCTATATATGTCTCATTCTCACTGGGGTAATGATCTCTGGTTTCGTTACAGATGCCATTGGAACGCACTCTGTTTTTGGAGCTTTTGTCTTTGGTCTGGTTATTCCAAATGGACAACTTGGTGTCACTCTCATAGAAAAGCTTGAGGACTTTGTCTCAGGGCTTCTGCTTCCTCTCTTCTTTGCCATCAGCGGGCTTAAGACTGATGTCACCAAAATCCACGGAGCTCTTACATGGGGATTTCTATTTCTGGTCATCATCCTTGCTTGCGCTGGCAAAATTGCTGGGACTCTCATTGTTGCTCTGTTTTATCAGATGCCCTTACGTGAAGGAATTGTCCTTGGCTTGCTTATGAACACCAAAGGCCTCGTTGAAATGATCGTCCTCAACGTTGGGAGGGACCAACATGTCTTAGACGATGAAACATTCGCCATCATGGTTACAGTAGCTGTCATTATGACTTCCATCATTGCACCCATTGTAACACATATTTACAAGCCGGCGAGGAAATTCATCCCATACAAACGAAGAACAATTCAGAGGTCAAAGCCAGACGGTGAGCTTAGAATACTGGTCTGCATCCACACCCCTCGAAATGTCCCAACAATCATCAACCTCCTCGAAGCCTCCCACCCTTCCAAGAAATCACCAATATGCGTCTATGTACTCCACCTAGTAGAACTTACTGGCCGCGCATCTGCTATGCTTATTGTTCACAACACTCGGAAATCTGGCTGCCCAGCCCTCAACAGGACCCAAGCTCAATCCGACCACATCATCAACGCATTTGAGAACTACGAGCAGCATTCCTCCTGCGTGTCCGTTCAGCCCCTGACAGCAATTTCCCCTTACTCCACCATGCATGAAGATATCTGCAACTTGGCAGAAGACAAACGTGTAGCCTTTATCATCATCCCTTTCCATAAGCAGCAAACAGTTGATGGAGGGATGGAAGCCACAAACCCAGCTTTTCGAGCAGTGAACCAGAATGTATTAGCAAATGCACCTTGCTCAGTCGGTATTCTTGTTGACAGAGGCTTGAATGGGTCCACACGCTTGGCTGCAAGTCAGGTATCTCATCACATTGCTGTGCTGTTCTTTGGCGGACCAGATGATAGAGAGGCACTGTCATATGCAGAGAGGATGTCTGAACATCCTGGGATTAGCCTCACCGTGATGCGGTTCATTGCTGGGGATGAAACGGTTGAGTCCACAGTGGAGCCTAGCAGTGATCCAAATGATCCTAGGATATTAACAGTGATAACAGACAGTGACAGAGAGAAACAGCTTGATGAGGAGTATATAAACGACTTCAGGATGAAGAATTCTAATGATGAATCGATTGTTTACACAGAGAAGATTGTTAACAATGGAGAGGAGACAGTGGCGGCAGTAAGATCAATAGACAGCATACATGACCTGTTCATAGTTGGGAGAGGACAAGGAATGATATCACCACTCACAGCAGGGCTCACTGACTGGAGCGAGTGCCCAGAGCTCGGAGCGATTGGAGATATGCTGGCCTCTTCAGATTTTGCATCAACAGTTTCAGTGCTGGTGGTACAACAGTATGTTGGAGTAGGGCCACAAGAAGATGGATTGGGAACGCCTGACAGCCCGGCTCCACCAATCGACCAATATAATAGTCTCCTGCAGATGAACCGGAGGCCTCCGCAGCAGAGGGGCCCGGCTATGTACAGTCCATAA 2514 0.4749 MADVTATVNRTDDMIVCYSPTMITTNGIWQGDNPLDYSLPLFILQLTLVVVTTRLLVFILKPLRQPRVISEILGGVLLGPSVLGQNLHLANLIFPLRSVMVLETMANVGLLYFLFLVGVEMDLTVIRRTGKKAIAIAIIGMILPFIIGCAFSLILHHEDRQMNRSTFVLFLGVALSVTAFPVLARILAELKLINTELGRMAMSSALINDMCAWVLLAVAIALAENESSSLASLWVILSSVFFVVVCIFIVRPVISWMIRRTPEGESFSEFYICLILTGVMISGFVTDAIGTHSVFGAFVFGLVIPNGQLGVTLIEKLEDFVSGLLLPLFFAISGLKTDVTKIHGALTWGFLFLVIILACAGKIAGTLIVALFYQMPLREGIVLGLLMNTKGLVEMIVLNVGRDQHVLDDETFAIMVTVAVIMTSIIAPIVTHIYKPARKFIPYKRRTIQRSKPDGELRILVCIHTPRNVPTIINLLEASHPSKKSPICVYVLHLVELTGRASAMLIVHNTRKSGCPALNRTQAQSDHIINAFENYEQHSSCVSVQPLTAISPYSTMHEDICNLAEDKRVAFIIIPFHKQQTVDGGMEATNPAFRAVNQNVLANAPCSVGILVDRGLNGSTRLAASQVSHHIAVLFFGGPDDREALSYAERMSEHPGISLTVMRFIAGDETVESTVEPSSDPNDPRILTVITDSDREKQLDEEYINDFRMKNSNDESIVYTEKIVNNGEETVAAVRSIDSIHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDMLASSDFASTVSVLVVQQYVGVGPQEDGLGTPDSPAPPIDQYNSLLQMNRRPPQQRGPAMYSP* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1530 837 PANTHER CATION/H + ANTIPORTER 16 794 - -
Vvi4g1530 837 Gene3D - 41 439 IPR038770 -
Vvi4g1530 837 FunFam Cation/H(+) antiporter 15 41 441 - -
Vvi4g1530 837 MobiDBLite consensus disorder prediction 811 825 - -
Vvi4g1530 837 Pfam Sodium/hydrogen exchanger family 48 432 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi4g1530 837 MobiDBLite consensus disorder prediction 799 837 - -
Vvi4g1530 837 Gene3D - 483 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1530 Vvi-Chr4 22994815 22997726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1530 11 809 Antiporter Super Family AT2G13620 74.718 0.0 1211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1530 - - vvi:100244861 1550.03