Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1525 ATGGCATCAGTCAACTCCAGTGTTCTAGCATGTAACTATGCCATCTCCGGTGCTGGAGCTCCGGAGCTTAACTCCAAGCTTGTTTCAATGCCATCTGCTGCATCCCCAGCTGTGGCTGGTCTCAAACTGCCTGCGATCAGGGCCCAACAGGCCAGAGTTTCTGATTCCAAAAAATGGGGTGCTGGAGAGGGGAGAAGAGCAGCCCTTGTGTACTTGGCTGCCACCCTTTTCACCACTGCTGCTGCCTCCTCTTCTGCCAATGCTGGGGTCATTGACGACTACCTGGAAAAGAGCAAAGCGAACAAGGAGTTGAACGACAAGAAAAGGTTGGCTACAAGCGGAGCAAACTTTGCCAGAGCATACACTGTTCAATTTGGAACCTGCAAGTTCCCTGAGAACTTCACTGGCTGCCAGGATCTCGCCAAGAAAAAAAAAGTGCCTTTCCTTTCTGAAGATCTAGAGTTGGAGTGTGAAGGAAGGGACAAGTACAAGTGCGGTTCCAATGTTTTCTGGAAATGGTGA 522 0.5019 MASVNSSVLACNYAISGAGAPELNSKLVSMPSAASPAVAGLKLPAIRAQQARVSDSKKWGAGEGRRAALVYLAATLFTTAAASSSANAGVIDDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGRDKYKCGSNVFWKW* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1525 173 Gene3D - 89 173 IPR044907 -
Vvi4g1525 173 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 173 IPR008796 GO:0009522|GO:0015979
Vvi4g1525 173 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 43 173 IPR008796 GO:0009522|GO:0015979
Vvi4g1525 173 FunFam Photosystem I reaction center subunit N 89 173 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1525 1 144 Calmodulin-binding Proteins AT5G64040 63.448 2.05e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1525 K02701 - vvi:100232935 313.923