Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi4g1453 | ATGGCTTGTGTCTATGTTGTTTTCTTACTCTTCTTTGTATCCTTTGAAGCTGTAGGAGCACAAGAAGAGCCCCCAGCTGGCTTCATAACCTTGGAATCAGCTACACTCTCCCCTACAATTCAACCCACTTCATGGACGTCACCTTCTGGCATATTTGCATTTGGGTTCTACCCTCAAGGAAGTGATTTTTTATTGGGAATTTGGTTAATGGATGAAGAAAAAACTCTTGTATGGACTGCACATCGAGATGACCCGCCGGTGCCCTTGGATGCTAAACTCTTGACCATTAACGGCAAGCTCCTTCTGAGAACAGGGCAAAGTGAGGAAAAAGTCATTGTGGAGTCGGCTTCATTTGCTTTCATGAGAGACTCAGGAAATTTTATGGTCTACAACCAAAGTTTCCATGTCATCTGGGAAAGTTTTAAATTTCCTACTGATACCATATTGGGAGGCCAGAATCTGACGACCGGGGATCAATTGTTTTCTAGTTTATCTGAAACTAATCATTCCACTGGACGGTTTCGTCTCCAGATGCAGACTGATGGGAATCTTGTTTCATACTTTGTAGATGCTTTACCCATGGTACTGGATGCTTATTGGGCTTCTGGTACCAGGGACGGCGACGTCTCCATGAATCAGATGTATCTTAATGATGCTACTGGCCAGCTAGTCATCAGAAACAGCACCAATTTGGTAACACGAGCAGTCTTATACACCAGTTCGCGTTCTGCCAAGAACACAATCTACAGTGCAAGGCTTAGCTATGATGGGATGTTCCGAATGTATTCTCACAGTTTTGACAGTAACAGTAATGGCGATAAGAGCGTTCTCTGGTCAGCAGTGGCCGAGGACGAGAAGTGTCAAGTAAAAGGTTTCTGTGGTTTGAACAGCTACTGCACCCGGAATAACAGTGAACCCTACTGTGTTTGTCTTCCTGGTACTGACTTTGTTGATTCCAACCAGAAGCTACTTGGCTGCCTGAAGAATTTTACTGAATACAGCTGTAACAATATCTCTTATTCTGCCTCTTATCACATTGTTCGTGCAGAGCAGAATCTGCAATGGGATGACCTTCCTTATTTTAAAGGAACGATGAGTATGGAAGAATGCATAAACGGCTGTTTAGAGGACTGTAATTGCGAGGTGGCGCTGTATGATAAGGATGGCTATTGCTCAAAACGAGCACTTCCACTGAAATATGCCAGAAGTGATGAAAATGTGCTGTCCGCAGCTTTCTTCAAGGTAAGCAAAAAAAGTATTGAAATCAAGAATGATACAAGCTTCATTCCAGACCATACAACAGAGGTCACGACCACAAGCACTAAAGACTTGGTGCTAATTCTTGTTATCACTGTTGGCTTCATTACATGTTCATTTGTTTCCCTTGCAATATCTGGTTTTTTCATTTTCAAGTTTCGAGTTGCGAAGTACAGAAGGCTTCTGGAAGATGGAAAACGGGGCCTTATGGAGGAGCTCAAAATGCAATCTTTTTCTTACAAGGAGCTACAGAAAGCAAGCAGAAACTTCAAAGAAGAACTAGGTAAGGGCGCTTTTGGGACTGTTTACTTGGGAGTTCTGCACAAAGGTAAGAAACTTGTTGCAATAAAGAGACTGGAGAAGATGGTGGAAGAAGGGGAAAGGGAGTTTCGGGCAGAGATGAGAGCAATTGGGAGAACTCATCACAAGAACTTGGTTCGCTTGCTCGGCTACTGCACTGAGGGCTCAAAGAGGCTTCTTGTTTATGAATATATGAGTAACCGTTCTCTTGCAGATATTCTCTTCAAGAGCAAAACACGCCCACCTTGGGATGAAAGGGTTAGAATTGCACTGGATGTGGCCAGAGGGATCTTGTATCTACATGAGGAATGCGAGGCACCTATTATTCATTGTGATATAAAGCCTCAAAACATTTTGATGGATGATTTCTGGACTGCTAAGATCTCTGACTTCGGGCTGGCAAAGTTGCTAATGCCAGATCAAACGAGGACCTTTACAGGGGTTAGAGGCACTAGAGGGTACTTGGCACCAGAATGGCAGCAGAATATCCCAATATCAGTGAAGGCCGATGTTTATAGTTATGGTATAGTACTCTTGGAACTTGTGTGTTGCAGAAGGAACTTGGAGGTGAATGTGTCAAAGCCAGAAGAGATTGTTCTTTCTAATTGGGCCTACAAGTGCTTTGTGGCTGGAGAGCTGTACAAACTTTTGGGTGGTGAAGAAGTAGAGAGGAAGAGCTTGGAGGAAATGGTTAAGTTGGGACTTTGGTGCATTCAAGATGAGCCAGCTCTTCGTCCTTCTATCAAGAGTATTGTGCTGATGTTGGAAGGAATTACTGAAATTGCTGTTCCTCCATGCCCAACCACTACCTCCACCTAA | 2376 | 0.4356 | MACVYVVFLLFFVSFEAVGAQEEPPAGFITLESATLSPTIQPTSWTSPSGIFAFGFYPQGSDFLLGIWLMDEEKTLVWTAHRDDPPVPLDAKLLTINGKLLLRTGQSEEKVIVESASFAFMRDSGNFMVYNQSFHVIWESFKFPTDTILGGQNLTTGDQLFSSLSETNHSTGRFRLQMQTDGNLVSYFVDALPMVLDAYWASGTRDGDVSMNQMYLNDATGQLVIRNSTNLVTRAVLYTSSRSAKNTIYSARLSYDGMFRMYSHSFDSNSNGDKSVLWSAVAEDEKCQVKGFCGLNSYCTRNNSEPYCVCLPGTDFVDSNQKLLGCLKNFTEYSCNNISYSASYHIVRAEQNLQWDDLPYFKGTMSMEECINGCLEDCNCEVALYDKDGYCSKRALPLKYARSDENVLSAAFFKVSKKSIEIKNDTSFIPDHTTEVTTTSTKDLVLILVITVGFITCSFVSLAISGFFIFKFRVAKYRRLLEDGKRGLMEELKMQSFSYKELQKASRNFKEELGKGAFGTVYLGVLHKGKKLVAIKRLEKMVEEGEREFRAEMRAIGRTHHKNLVRLLGYCTEGSKRLLVYEYMSNRSLADILFKSKTRPPWDERVRIALDVARGILYLHEECEAPIIHCDIKPQNILMDDFWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWQQNIPISVKADVYSYGIVLLELVCCRRNLEVNVSKPEEIVLSNWAYKCFVAGELYKLLGGEEVERKSLEEMVKLGLWCIQDEPALRPSIKSIVLMLEGITEIAVPPCPTTTST* | 792 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi4g1453 | 791 | SMART | blect_4 | 36 | 144 | IPR001480 | - | |
Vvi4g1453 | 791 | SMART | blect_4 | 145 | 272 | IPR001480 | - | |
Vvi4g1453 | 791 | CDD | STKc_IRAK | 513 | 777 | - | - | |
Vvi4g1453 | 791 | Pfam | Protein kinase domain | 509 | 771 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi4g1453 | 791 | FunFam | S-receptor-like serine/threonine-protein kinase | 477 | 583 | - | - | |
Vvi4g1453 | 791 | ProSitePatterns | Protein kinases ATP-binding region signature. | 513 | 536 | IPR017441 | GO:0005524 | |
Vvi4g1453 | 791 | Gene3D | Phosphorylase Kinase; domain 1 | 482 | 583 | - | - | |
Vvi4g1453 | 791 | Gene3D | - | 145 | 272 | IPR036426 | - | |
Vvi4g1453 | 791 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 584 | 782 | - | - | |
Vvi4g1453 | 791 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 36 | 786 | - | - | |
Vvi4g1453 | 791 | Pfam | D-mannose binding lectin | 75 | 155 | IPR001480 | - | |
Vvi4g1453 | 791 | Gene3D | Transferase(Phosphotransferase) domain 1 | 584 | 782 | - | - | |
Vvi4g1453 | 791 | Gene3D | - | 36 | 144 | IPR036426 | - | |
Vvi4g1453 | 791 | ProSiteProfiles | Protein kinase domain profile. | 507 | 777 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi4g1453 | 791 | FunFam | Serine/threonine-protein kinase | 144 | 275 | - | - | |
Vvi4g1453 | 791 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 627 | 639 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi4g1453 | 791 | ProSiteProfiles | Bulb-type lectin domain profile. | 145 | 274 | IPR001480 | - | |
Vvi4g1453 | 791 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 169 | 264 | IPR036426 | - | |
Vvi4g1453 | 791 | PIRSF | SRK | 1 | 791 | IPR024171 | GO:0004674 | |
Vvi4g1453 | 791 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 65 | 206 | IPR036426 | - | |
Vvi4g1453 | 791 | SUPERFAMILY | Protein kinase-like (PK-like) | 492 | 775 | IPR011009 | - | |
Vvi4g1453 | 791 | Coils | Coil | 535 | 555 | - | - | |
Vvi4g1453 | 791 | SMART | serkin_6 | 507 | 774 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi4g1453 | Vvi-Chr4 | 21645249 | 21647624 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi4g1453 | 483 | 774 | Glycoside Hydrolase | AT3G07070 | 40.066 | 3.90e-65 | 221 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Vvi4g1453 | Pkinase | 8.4e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi4g1453 | - | - | vvi:100267807 | 1585.85 |