Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi4g1449 | ATGGGTGTTAGAGCTGAAACAGCGGAACCCAAGCTGATAAAGTTGGGTTCTTCACTTTTTCCACACAATGGATCCAGTTCATGGGTCTCACCCTCCGGCCATTTTGCATTTGGTTTCTACCCGCAAGGCACTGGATTTGCAGTAGGCGTATGGCTGGTCAGTCAATCTGGAAACACCGTTGTCTGGACTGCAAACCGAGATAAGCCGCTGGTGTCCTTCAACACGACTCTTGAATTCACCACAAATGGTAAGCTGCTTCTTCGAACTGGGCCGGGTGAACAAATAACCATTGCAGATGTGGCAGAATCCGCAGCCTCAGCTTCTATGCTCGATTCTGGTAATTTTGTTCTCTTCGGTGATAATTCTTCTTCTATCATCTGGCAAAGCTTCCAATACCCAACTGATACCCTTCTGGGAGGCCAGAATTTTTCCACCGGCGATATACTGTCTTCCAGGAAAACGGAATCTCCTGCTATAGGAGATTTTTATCTTAGTACGTCAGATGGACAGATTGTTTCCTATCCCTACAATCTGGCTGTTTCGGAGGACCCTTATTGGACTGTCGATGCACGAGATCTCAACGACATGGGGCTTTTAAGCTCATATGATGCTTTTACACTTACTCTAGCCAGCAACAATATCTCATCAGATGACGCCAAAAACGAGACCATCATTTACAGAGCAACTTTAGATGTTGATGGGATTTTCAGGTTGTATTCCCATAGCTTTGGGAACAGTAATATCTCCACTGTCTCCATTATGTGGTCGGCAATCAAAAACCCATGTGATGTGAAAGGTCTCTGCGGTGTTAATGCCTTATGTTCAAGCAATGGCACCAATGCCAACTGTTCTTGCGTTCCAGGGTTCGTATCCATTAACCGGGAGAAGTATTCGGGGTGCTACAGGAGCTTCAATAATGAAGAAGGATGCAGAGGACAAGAGCCAGAATCGATCTACAACATTACTACCTTAAGAAATGTGAAACTTATTTTAATCCTTGCTTCAAGTTTGGGTTCCATTGCTTTCTTATGTGCTCTAGTTGCAATGTCTAGCTTCTTTATATACAGAAGCCAAGTTCATCGGTACAGAAAGCTGTCAGAAACTGCAATGGAAGAGTTTACTCTGCGATCGTTTTCTTATAATGATCTGGAGAAAGCTACAGATGGGTTCAGGGAAGAGTTGGGTAGGGGTCCTTTTGGAGCAGTGTATAAAGGGACTATAGCTCAAGGCAACCAGACTATTGCTGTGAAGAGACTAGAAAAAGCTGTGGAAGAAGGAGAAAGGGAGTTCCAAGCAGAAATGGCCATAATTGGGCGAACCCATCACAGGAACTTGGTCCGGTTGCTGGGTTTTTGTATGCAGGGCTCTAGGAAGCTTCTTGTTTATGAATACATGAGCAATGGCTCACTTGCAGATCTTCTCTTCAATGGTGAAAAGCGCCCGATTTGGAGAGAAAGAGTCAGAATTGCCCTAGATGTAGCAAGAGGGATCTTCTACCTCCATGAAGAGTGTGAGGTCCACATCATCCATGGCAACATAAAGCCTAAGAACATACTATTGGATGATTCTTGGACTGCCAAGCTTTCAGATTTCAGGCTAGCAAGGCTTCTGAGGCCTAATCAAACTGGAACCATTTCTCGTCTCGGAGGGAGTAGTAGAGGCTATTCAGCACCCGAGCGGCAGAAGAGGATGTTGATATCAGTGGAAGCAGATGTCTACAGTTTCGGAGTAGTGCTATTGGAGATTGTGTGTTGCAGAAGTAATTTGGATATCAATGTTTCAACAGGAGACGAGATACTTCTTTGCAGTTGGGTGTACAGTTGCTTTGTGGCAAGAGAGTTGGAGAAGCTTGTGGAAGGTGAAGAAGTGAACATGAAAACCCTGGAAAGGATGGTGAAGGTTGGATTATTGTGCATTCAAGATGATCCAAGTCTGCGCCCTACAATGAAGAATGTGATCCTGATGTTGGAAGGGACCATGAATGTGCCTGTACCTCCATCTCCAACTCCTCTATTTTCCTGA | 2022 | 0.4481 | MGVRAETAEPKLIKLGSSLFPHNGSSSWVSPSGHFAFGFYPQGTGFAVGVWLVSQSGNTVVWTANRDKPLVSFNTTLEFTTNGKLLLRTGPGEQITIADVAESAASASMLDSGNFVLFGDNSSSIIWQSFQYPTDTLLGGQNFSTGDILSSRKTESPAIGDFYLSTSDGQIVSYPYNLAVSEDPYWTVDARDLNDMGLLSSYDAFTLTLASNNISSDDAKNETIIYRATLDVDGIFRLYSHSFGNSNISTVSIMWSAIKNPCDVKGLCGVNALCSSNGTNANCSCVPGFVSINREKYSGCYRSFNNEEGCRGQEPESIYNITTLRNVKLILILASSLGSIAFLCALVAMSSFFIYRSQVHRYRKLSETAMEEFTLRSFSYNDLEKATDGFREELGRGPFGAVYKGTIAQGNQTIAVKRLEKAVEEGEREFQAEMAIIGRTHHRNLVRLLGFCMQGSRKLLVYEYMSNGSLADLLFNGEKRPIWRERVRIALDVARGIFYLHEECEVHIIHGNIKPKNILLDDSWTAKLSDFRLARLLRPNQTGTISRLGGSSRGYSAPERQKRMLISVEADVYSFGVVLLEIVCCRSNLDINVSTGDEILLCSWVYSCFVARELEKLVEGEEVNMKTLERMVKVGLLCIQDDPSLRPTMKNVILMLEGTMNVPVPPSPTPLFS* | 674 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi4g1449 | 673 | Pfam | Protein tyrosine and serine/threonine kinase | 390 | 654 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi4g1449 | 673 | Pfam | D-mannose binding lectin | 59 | 144 | IPR001480 | - | |
Vvi4g1449 | 673 | Gene3D | Transferase(Phosphotransferase) domain 1 | 465 | 667 | - | - | |
Vvi4g1449 | 673 | Gene3D | - | 13 | 132 | IPR036426 | - | |
Vvi4g1449 | 673 | CDD | STKc_IRAK | 394 | 658 | - | - | |
Vvi4g1449 | 673 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 60 | 148 | IPR036426 | - | |
Vvi4g1449 | 673 | ProSiteProfiles | Protein kinase domain profile. | 388 | 672 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi4g1449 | 673 | ProSiteProfiles | Bulb-type lectin domain profile. | 13 | 130 | IPR001480 | - | |
Vvi4g1449 | 673 | FunFam | Putative receptor-like protein kinase | 465 | 664 | - | - | |
Vvi4g1449 | 673 | Gene3D | Phosphorylase Kinase; domain 1 | 352 | 464 | - | - | |
Vvi4g1449 | 673 | Coils | Coil | 611 | 631 | - | - | |
Vvi4g1449 | 673 | SMART | blect_4 | 19 | 133 | IPR001480 | - | |
Vvi4g1449 | 673 | SUPERFAMILY | Protein kinase-like (PK-like) | 365 | 657 | IPR011009 | - | |
Vvi4g1449 | 673 | FunFam | S-receptor-like serine/threonine-protein kinase | 357 | 464 | - | - | |
Vvi4g1449 | 673 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 329 | 667 | - | - | |
Vvi4g1449 | 673 | Pfam | S-locus glycoprotein domain | 218 | 291 | IPR000858 | GO:0048544 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi4g1449 | Vvi-Chr4 | 21559587 | 21561875 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi4g1449 | 325 | 663 | Receptor kinase-like Gene Family | AT5G59270 | 38.261 | 2.25e-65 | 226 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Vvi4g1449 | PK_Tyr_Ser-Thr | 1.5e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi4g1449 | - | - | qsu:111987199 | 683.33 |