Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1429 ATGGTGGTTGCGCAACTAGCCTCTGGAGGAGTTCAAATTTTGTACAAGCTGGCTATCAACGATGGCATGAACACCAGGGTTCTTATAGCCTATAGATACATCTTTGCCACAGCTTTTATATCTTCTCTTGCTTTCATCTTGGAAAGAGGAGCATTGGGTCAGAATTTGTACGTCGAAAGCATGGTTCTAACATCTCCGACTTTTTCAGCGGCCATGGCTAACCTCATTCCGGCTGTTACGTTCATCTTCGCCATTTTTTTAGGGTTGGAGAAGTTGGCGATCCGAACGTGGGCAGGGAAGGCTAAGGTGACTGGCACCCTATTGGGCATAGGTGGAGCCATGGTCCTCACCTTCTACAAAGGACCACAGATCAACATATGGTCAACCAAAGTTCACCTGTTAAAGCACAAAAACCAACACGTGGCAGCATCACACCGGGGGATGGATAATCGTGTGTTGGGCTCATTACTGGCTGTAGCAAGTTGTTTCTCCTATGCAACCTGGTATATAATCCAGGCGAAGATGGGAGAGAGGTACCCATTTGACTACTCTAGCACTGCTCTAATGTGTGCTTCTGCATCGGTCCAAACAGTTGTGTATGCCATGTGTAAGGAAACAAATTGGTCCGCGTGGAAGCTCGGATGGAACATCAGACTTCTCACTGTTGCCTACACGGGATATTTGTCGTCTGGATTTATGGTGGTCCTAGCCAACTGGTGTGTACGCAAGAGGGGTCCTCTTTTTGTATCGGTCTTCAACCCTCTCTTGCTGGTATTTGTAGCCATCCTTGATTCCTTACTCCTCGATGAGAAGTTGCATCTCGGAAGCAGTATAATAGGAGGGGTGCTGATAGTAATTGGGTTATACGCCATGTTGTGGGCAAAAAGGGAGGAGATGAAGAGCAAGGCCAGACTCTCACATTCCAAAAGGTCCAAAGAGGCAGAAAAAATAAATGTGGGCACAGCCCCAGCTGAAGATGATGAGAAAGCTATTGCTAGTGATGTATCAGCTGCAGCTACCGCCAACCCCAGACAGTGA 1038 0.474 MVVAQLASGGVQILYKLAINDGMNTRVLIAYRYIFATAFISSLAFILERGALGQNLYVESMVLTSPTFSAAMANLIPAVTFIFAIFLGLEKLAIRTWAGKAKVTGTLLGIGGAMVLTFYKGPQINIWSTKVHLLKHKNQHVAASHRGMDNRVLGSLLAVASCFSYATWYIIQAKMGERYPFDYSSTALMCASASVQTVVYAMCKETNWSAWKLGWNIRLLTVAYTGYLSSGFMVVLANWCVRKRGPLFVSVFNPLLLVFVAILDSLLLDEKLHLGSSIIGGVLIVIGLYAMLWAKREEMKSKARLSHSKRSKEAEKINVGTAPAEDDEKAIASDVSAAATANPRQ* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1429 345 MobiDBLite consensus disorder prediction 302 330 - -
Vvi4g1429 345 PANTHER WAT1-RELATED PROTEIN 1 306 IPR030184 GO:0016020|GO:0022857
Vvi4g1429 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 296 - -
Vvi4g1429 345 Pfam EamA-like transporter family 153 292 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1429 Vvi-Chr4 21244408 21247369 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1429 1 323 Nodulin-like Gene Family AT1G68170 42.075 7.40e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1429 - - vvi:100254116 639.802