Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1428 ATGAATAGGTTGGAGAGGTTGAAGATTCGAACGTGGGCAGGGAGGGCTAAGGTGATTGGCACCGTATTGGGCATAGGTGGAGCCATGGTCCTCACCTTCTACAAAGGACCACAGATCAACATATGGTCAACCAAAGTTAACCTTTTAAAGCACAAAGACCAACACGTGGCAGCATCACACGGGGAGTTGGATAATCATGTGTTGGGCTCAATACTGGCCGTAGCCAGTTGTTTCTCGTATGCAATCTGGTTGATAATACAGGCGAAGATGGGAGAGAGGTACCCATTTGACTACTCTTGCACTGCTCTAATGTGTGCTTCTGCAACGGTCCAAGCAATTGTGTATGCCATGTGTAAGGAAAAAAATTGGTCCGCGTGGAAGCTCGGATGGAACATCAGACTTCTCACTGTTGCCTACACGGGATTTTTTGCGTCTGGATTTATGGTGGTCCTAGTCAGCTGGTGTGTACGCAAGAGGGGTCCTCTTTTTGTATCAATCTTCAACCCTCTCATGCTGGTATTTGTGGCCATCCTTGGTTCCTTAATCCTCGATGAGAAGTTGCATCTCGGAAGTATAATAGGAGGGGTGCTGATAGTAATTGGGTTATACGCCATGTTGTGGGCAAAAGGGGCGGAGATGAAGAGCATGGCCACACTCTCACATTCCAAAAGCTCCAAAGAGGCAGAAATAATAAATGTGGGCACAGCCCCAGCTAAAGATGATGAGGATGCTATTGCTAGTGATGTATCAACTGCAGCTGCCGCCAACCCCAGACAGTGA 780 0.4769 MNRLERLKIRTWAGRAKVIGTVLGIGGAMVLTFYKGPQINIWSTKVNLLKHKDQHVAASHGELDNHVLGSILAVASCFSYAIWLIIQAKMGERYPFDYSCTALMCASATVQAIVYAMCKEKNWSAWKLGWNIRLLTVAYTGFFASGFMVVLVSWCVRKRGPLFVSIFNPLMLVFVAILGSLILDEKLHLGSIIGGVLIVIGLYAMLWAKGAEMKSMATLSHSKSSKEAEIINVGTAPAKDDEDAIASDVSTAAAANPRQ* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1428 259 Pfam EamA-like transporter family 68 206 IPR000620 GO:0016020
Vvi4g1428 259 SUPERFAMILY Multidrug resistance efflux transporter EmrE 128 210 - -
Vvi4g1428 259 PANTHER WAT1-RELATED PROTEIN 4 221 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1428 Vvi-Chr4 21241493 21242831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1428 3 238 Nodulin-like Gene Family AT1G68170 43.933 2.43e-64 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1428 - - vvi:100243646 503.056