Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1426 ATGGGTGGGAAGCTCTGCAACATTGTTGATGGGACGAAACCAGTCATAGTAATGGTGGCTGTGCAACTAGTCTTTGGAGGAGTTAATATTTTATACAAGTTGGCTATCAACGATGGAATGAACACCAGGGTTCTTGTAGCCTATAGATTCATCTTTGCCACAGCTTTTATATCTCCTCTTGCTTTCATCTTGGAAAGGAAGAGCAGTCCAAGATTGACATGGATGATAGCTCTACAAGGGTTTCTATGCGGATTATTTGGAGGAGCATTGGGTCAGAATTTGTACCTCGAAAGTTTGGCTCTAACATCTCCGACTTTTTCAGCAGCCATGGTTAACCTCATTCCGGCTGTTACGTTCATCTTCGCCATTTCTTTAGGGTTGGAGAAGTTGGCGATTCGAACGTGGGCAGGGAAGGCTAAGGTGGGTGGCACCCTATTGGGCATAGGGGGAGCCATGGTCCTCACCTTCTACAAAGGACCACAGATCAACATTTGGTCAACCAAATTGTTTCTCCTATGCAATCTGGTTGATAATCCACTCCATATTTTCTCCAATGCACCCAAAGTACCCTCATATAAATTTATTGATCCTATCTCACCCCTTGAATGTGAACAGGCGAAGATGGGAGAGAGGTATCCATACCAGTACTCTAGCACTGCTCTAATGTGTGCTGCTGCAACGGTCCAAGCAATTGTGTATGCCACGTGTATGGAAGGAAATTGGTCCACGTGGAAGCTCGGATGGAACATCAGACTTCTCACTGTTGCCTACACGGGATTTTTGGCGTCTGGATTTATGGTGACTCTAATCACCTGGTGTATACGCAAGAGGGGTCCTCTTTTTGTATCAATCTTCAACCCTCTCATGCTGGTATTTGTAGCCATCCTTGGTTCCTTAATCCTCGATGAGAAGTTGCATCTCGGAAGGTCCCCTCTCCGCTCTCCCTTCTATCTATAA 957 0.4556 MGGKLCNIVDGTKPVIVMVAVQLVFGGVNILYKLAINDGMNTRVLVAYRFIFATAFISPLAFILERKSSPRLTWMIALQGFLCGLFGGALGQNLYLESLALTSPTFSAAMVNLIPAVTFIFAISLGLEKLAIRTWAGKAKVGGTLLGIGGAMVLTFYKGPQINIWSTKLFLLCNLVDNPLHIFSNAPKVPSYKFIDPISPLECEQAKMGERYPYQYSSTALMCAAATVQAIVYATCMEGNWSTWKLGWNIRLLTVAYTGFLASGFMVTLITWCIRKRGPLFVSIFNPLMLVFVAILGSLILDEKLHLGRSPLRSPFYL* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1426 318 PANTHER WAT1-RELATED PROTEIN 13 307 IPR030184 GO:0016020|GO:0022857
Vvi4g1426 318 Pfam EamA-like transporter family 13 137 IPR000620 GO:0016020
Vvi4g1426 318 Pfam EamA-like transporter family 214 307 IPR000620 GO:0016020
Vvi4g1426 318 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
Vvi4g1426 318 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1426 Vvi-Chr4 21234508 21237843 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1426 13 308 Nodulin-like Gene Family AT1G25270 40.584 1.83e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1426 - - vri:117912997 471.855