Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1425 ATGGTTCTCACATTCTACAACGGAATAGAACTCAAGATTTGGACAACACACATCAACTTGCTAAGTGATGGTGGTAAGGTAGCAGCATCACAACATACCTCTCGTAATCAAGGATTGGGTGCCATAATGGCTGCAGCTAGTAGTTTGTCAGCTGCAATTTGGTTGATAATTCAGGCAAGGATGAGTAAGGTGTACCCACTATATTCTGGCACTTTTCTTATGTGTGCTTGTGCAGGAGTACAGTGTGCAGTCTATGCCATGTCTAGGGAGAGGGATTGGTCAGAGTGGAGGCTTGGTTGGAACATTAGACTTCTCACTGTTATTTATACGGCAGTTGTTGGCACTGGAGTAATGGTTTCACTAATGGCCTGGGTTTCAATGGTGAGAGGCCCAATATTTGTATCTTCTTTCTTTCCATTAATGCCTATAATGGTTGCAGTAGCTTCATCGCTATTACTCGATGAGAAGCTACATTTGGGAAGCGTAATAGGAGCAGTACTAATCATAATTGGACTGTATGTTGTGCTATGGGGAAAAGGAAAGGAGATGAAGAAAACGGCCCAACTTGACGGCTCGAAAAGCTTCAGGGGTTCAGGACTAGGAGACGTAGACTTAGGAACCTCATCCAGAGATGGTAATCGTCTTTCTCCTGGAGCTATTGTTCCCACCCAGATTAAGTTGGTAAAGTAA 690 0.4362 MVLTFYNGIELKIWTTHINLLSDGGKVAASQHTSRNQGLGAIMAAASSLSAAIWLIIQARMSKVYPLYSGTFLMCACAGVQCAVYAMSRERDWSEWRLGWNIRLLTVIYTAVVGTGVMVSLMAWVSMVRGPIFVSSFFPLMPIMVAVASSLLLDEKLHLGSVIGAVLIIIGLYVVLWGKGKEMKKTAQLDGSKSFRGSGLGDVDLGTSSRDGNRLSPGAIVPTQIKLVK* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1425 229 Pfam EamA-like transporter family 39 176 IPR000620 GO:0016020
Vvi4g1425 229 PANTHER WAT1-RELATED PROTEIN 1 186 IPR030184 GO:0016020|GO:0022857
Vvi4g1425 229 SUPERFAMILY Multidrug resistance efflux transporter EmrE 100 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1425 Vvi-Chr4 21229251 21230747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1425 1 184 Nodulin-like Gene Family AT1G68170 44.444 4.81e-49 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1425 - - vvi:100255679 441.81