Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1424 ATGGGTGGGAAGTTGAGCCACGTTGTTGAAAGTCTAATGCCAGCCACAGTGATGGTCTTGGTTCAGGCAACGATCTCAGGAATTAATATTTTCTACAAACTGGCTAAGAATGATGGCATGAACACCATGATTATGGTGGCTTACAGATATATCTTTGCTGCAGCTGCTATGGCTCCTCTTGCTTTGATCCTTGAATGGAATAGTAGACCAAGAATGACATGGATGGTCTTCTTCCAGGGGTTTTTCTGTGGCCTGTTTGGGTAA 264 0.4394 MGGKLSHVVESLMPATVMVLVQATISGINIFYKLAKNDGMNTMIMVAYRYIFAAAAMAPLALILEWNSRPRMTWMVFFQGFFCGLFG* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1424 87 PANTHER WAT1-RELATED PROTEIN 13 87 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1424 Vvi-Chr4 21225419 21226076 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1424 10 87 Nodulin-like Gene Family AT1G09380 43.590 1.22e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1424 - - vvi:100255679 166.007