Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1422 ATGACGAATCTTATCCCTGCTATGACATTTGTTATGGCTATTATATTAAGGATGGAGAGTCTGTCAATTAAAACAAATATAGGAAAAGCTAAGGTGTTGGGCACTATATTGAGCATAGCTGGTGCAATGGTTCTCACCTTTTACAAGGGAAGAGAGATCAAGCTATGGTCTACAAACATCAATTTGCTACATCAAGATCATCATGACATGTCAGAGCAGTCTTCTAGAAATCAAGCACTGGGTGGATTTCTAGGTGTGGCTAGTGCTGTGTCTATGGCAGTCTGGATGATACTTCAGGCAAAGCTGAGTATGGAATATCCACCTTACTCTGCTACTGCTCTTATGTCTCTTTGTGCATCCATCCAATCAGTTGTATATGCCCTTTGCACTGAAAGGCATTGGTCTGCATGGAAGCTTGGTTGGAATGTCAGACTTCTCACGGTTGTTTATGGTGTAAGATGCTTCCTTCAAATATCATGA 480 0.4104 MTNLIPAMTFVMAIILRMESLSIKTNIGKAKVLGTILSIAGAMVLTFYKGREIKLWSTNINLLHQDHHDMSEQSSRNQALGGFLGVASAVSMAVWMILQAKLSMEYPPYSATALMSLCASIQSVVYALCTERHWSAWKLGWNVRLLTVVYGVRCFLQIS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1422 159 PANTHER WAT1-RELATED PROTEIN 1 152 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1422 Vvi-Chr4 21178903 21179991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1422 4 150 Nodulin-like Gene Family AT1G68170 38.926 1.33e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1422 - - vvi:100267684 301.212