Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1419 ATGGTAAACAGGAAGAGTAGGCAAAAAATGACATGGATGATCTTCTTGCAAGGTTCCTTATGTGGTTTATTTGGGGGGTCATTAGGTCAAAACTTATATGCTGAGAGCTTGACTCTAACGTCCGCAACTTTTGCAGCAGCAATGACTAACATTATTCCAGCCATGGCATTTGTCCTGGCAATTGTCTTGAGGATGGAAAGATTAGCAATTGGCACGGTTGCTGGAAAGTCTAAGGTGTTGGGCACTCTATTAAGCATAAGTGGTGCACTGGTTCTCACATTTTACAAAGGAGTAGAGCTCAATTTGTGGTCAACTAACATCAACTTGCTGCATCATGGTGCACATAATAGCAGTAGTGTTGATCGTAGTGGGCTTGTATGGTGTTTTGTGGGGAAAAGGCAAGGAGATGAAGCAGACCGACCAAATAGATGGAGCAAAAAGCTCTACGGAGCCAGAATTGAGAGGCATTGTCATAGAAACCTCATCTAG 489 0.4315 MVNRKSRQKMTWMIFLQGSLCGLFGGSLGQNLYAESLTLTSATFAAAMTNIIPAMAFVLAIVLRMERLAIGTVAGKSKVLGTLLSISGALVLTFYKGVELNLWSTNINLLHHGAHNSSSVDRSGLVWCFVGKRQGDEADRPNRWSKKLYGARIERHCHRNLI* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1419 162 PANTHER WAT1-RELATED PROTEIN 9 119 IPR030184 GO:0016020|GO:0022857
Vvi4g1419 162 SUPERFAMILY Multidrug resistance efflux transporter EmrE 11 95 - -
Vvi4g1419 162 Pfam EamA-like transporter family 17 93 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1419 Vvi-Chr4 21142199 21144527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1419 3 116 Nodulin-like Gene Family AT1G25270 43.860 1.80e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1419 - - vvi:100255715 197.593