Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1417 ATGGTGGTGGTTCAAGTGTCACTGGGAGGAATTAATATTATGTACAAGTTGGCTAAGAGTGACGGCATGAGCATGAACGTTTTAATCGCCTACAGATATATATTCGCTGCAGCTTTTACGGCTCCACTTGCTTTGATATTTGATCGGAAGAGTAGGCAAAAAATGACATGGATGATCTTCTTGCAAGGTTCCTTATGTGGTTTATTTGGGGGGTCATTAGGTCAAAACTTATATGCTGAGAGCTTGACTCTAACGTCCGCAACTTTTGCAGCAGCAATGACTAACATTATTCCAGCCATGGCATTTGTCCTGGCAATTGTCTTGAGGATGGAAAGATTAGCAATTGGCACGGTTGCTGGAAAGTCTAAGGTGTTGGGCACTCTATTAAGCATAAGTGGTGCACTGGTTCTCACATTTTACAAAGGAGTAGAGCTCAATTTGTGGTCAACTAACATCAACTTGCTGCATCATGGTGCAGCAACCTCACAGCAATCATCTAATGATCAAGTCTTGGGCTCAATCTTAGCTGTTGTTGCTTGTATGTGCTTTGCAGTTTGGTTGATAATCCAGGCCAAGATTAGTATGGTGTATCCAAGCTACTCTGGAACTGCTCTTACTTGTGTCTCTGCAGCGATTCAGTCAGTTGTATATGCCATGTGTGCTGAGAAGAAATGGTCAGCATGGAAACTTGGTTGGGACATAAGACTTCTCACTGTTGTTTACACGGGAGTGTGGGCCACTGGATTGATGGTTGCAATAATGAGCTGGGCTGCAAGGCTGAGGGGGCCATTGTTTGTATCTTCTTTCTATCCCTTAATGCTTGTAACTGTTGCAATACTGGGGTCTCTCTTACTCGACGAGCAACTATACTTGGGAAGCATAATAGCAGTAGTGTTGATCGTAGTGGGCTTGTATGGTGTTCTGTGGGGAAAAGGCAAGGAGATGAAGCAGAACGCCCAAGTAGATGGAGCAAAAAGCTCTACGGAGCCAGAATTGAGAGGCATTGTCATAGAAACCTCATCTAGTACTAAGGGTAAACCGACCGCAACAAGTACTATTTGTCCCATCCAAGCTGCTGACCGAGGATCTGGTGCGGTAGTTTTGTGCCATCTACTAGAGCTTGAAGAATTCCCAAAGGATCGGCATGCTCTACGAATGAATGAATTTGATAAAATTGGAAAATGGAAAGAATTGTACAAGTTAGACGTTTCATCACCACTTTGTGGAAAATCGTTAAGTATGAATATGTTAGATACTTGTGACTCGATTGGTGAAATAGTTTTTGTCACACACAAAAAAATATTTTCTTGCGAATGA 1317 0.4267 MVVVQVSLGGINIMYKLAKSDGMSMNVLIAYRYIFAAAFTAPLALIFDRKSRQKMTWMIFLQGSLCGLFGGSLGQNLYAESLTLTSATFAAAMTNIIPAMAFVLAIVLRMERLAIGTVAGKSKVLGTLLSISGALVLTFYKGVELNLWSTNINLLHHGAATSQQSSNDQVLGSILAVVACMCFAVWLIIQAKISMVYPSYSGTALTCVSAAIQSVVYAMCAEKKWSAWKLGWDIRLLTVVYTGVWATGLMVAIMSWAARLRGPLFVSSFYPLMLVTVAILGSLLLDEQLYLGSIIAVVLIVVGLYGVLWGKGKEMKQNAQVDGAKSSTEPELRGIVIETSSSTKGKPTATSTICPIQAADRGSGAVVLCHLLELEEFPKDRHALRMNEFDKIGKWKELYKLDVSSPLCGKSLSMNMLDTCDSIGEIVFVTHKKIFSCE* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1417 438 PANTHER WAT1-RELATED PROTEIN 1 320 IPR030184 GO:0016020|GO:0022857
Vvi4g1417 438 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 313 - -
Vvi4g1417 438 Pfam EamA-like transporter family 171 308 IPR000620 GO:0016020
Vvi4g1417 438 Pfam EamA-like transporter family 7 138 IPR000620 GO:0016020
Vvi4g1417 438 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1417 Vvi-Chr4 21120062 21127168 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1417 1 332 Nodulin-like Gene Family AT1G25270 40.118 2.93e-81 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1417 - - vvi:100248813 679.478