Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1416 ATGGTGGTAGTTCAGATAATATTTGGAGGGCTAAATATTATGTACAAACTGGCTAGAAATGATGGCATGAGCATGAAGATTTTGGTCGCCTACCGAAATATCTTTGCAACAGCTATTATGGTTCCACTTGCTCTAATCTTTGAAGGGAAGAGTAGGCCAAAACTGACATGGATGATCTTCCTCCAGGGCTCATTGTGTGGATTATTTGGAGGGTCATTAGGTCAAAATTTATATGCCGAGAGCCTAAGCTTAACGTCAGCAACATTTGTAGCGGCAATGACAAACCTGGTTCCAGCTATGACATTTGTCATGGCAGTTTTCTTAAGGATGGAGAGATTAGCAATTGGAACAATTGCGGGAAAAGCTAAGTTAATGGGGACTATAATGAGCCTAGGTGGTGCAATGATTCTAACATTTTACAAAGGAGTAGAGATCAAGTTATGGTCAACCAACATCAACCTACTACATCATGGTGCTGCAGCATTACAAGAGTCGTCTCCTAATCAAGTGTTGGGCTCACTATTGGCTGTGGCTAGTTGTGTCTGTATTGCAGTTTGGTTGATAGTCCAGACTAAGATGAGCATGGTATATCCAAGCTACTCCGGAACTGATCTAATGTGTGTTTGTGCATCAATTCAATCGGTTGTATATGCCATGTGCACTGAGAGGGACTGGTCCGCATGGAAACTTGGTTGGGACATTAGGCTTCTCACTGTTGTTTACTCAGGAGTGTTGGCCTCTGGATTAATGGTTACACTAATGACCTGGGTTTCAAGGATGAGAGGCCCATTGTTCGTATCTTCTTTCTTTCCCTTAATGCTTGCAACCGTTGCAATACTTGGGTCACTCTTACTCCACGAACAGCTACATATAGGAAGCATAATTGCAGCAGTGTTGATCATAGTGGGCTTGTATATTGTTTTATAG 927 0.4218 MVVVQIIFGGLNIMYKLARNDGMSMKILVAYRNIFATAIMVPLALIFEGKSRPKLTWMIFLQGSLCGLFGGSLGQNLYAESLSLTSATFVAAMTNLVPAMTFVMAVFLRMERLAIGTIAGKAKLMGTIMSLGGAMILTFYKGVEIKLWSTNINLLHHGAAALQESSPNQVLGSLLAVASCVCIAVWLIVQTKMSMVYPSYSGTDLMCVCASIQSVVYAMCTERDWSAWKLGWDIRLLTVVYSGVLASGLMVTLMTWVSRMRGPLFVSSFFPLMLATVAILGSLLLHEQLHIGSIIAAVLIIVGLYIVL* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1416 308 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 307 - -
Vvi4g1416 308 Pfam EamA-like transporter family 3 137 IPR000620 GO:0016020
Vvi4g1416 308 Pfam EamA-like transporter family 171 308 IPR000620 GO:0016020
Vvi4g1416 308 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 122 - -
Vvi4g1416 308 PANTHER WAT1-RELATED PROTEIN 1 308 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1416 Vvi-Chr4 21096449 21098263 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1416 1 308 Nodulin-like Gene Family AT1G25270 42.949 4.88e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1416 - - vvi:100264216 583.563