Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1415 ATGACATGGATGATCTTCTTGCAAGGTTCCTTATGTGGTTTATTTGGGGGGTCATTAGGTCAAAACTTATATGCTGAGAGCTTGACTCTAACGTCCGCAACTTTTGCAGCAGCAATGACTAACATTATTCCAGCCATGGCATTTGTCCTGGCAATTGTTTTGAGGATGGAAAGATTAGCAATTGGCACGGTTGCTGGAAAGTCTAAGGTGTTGGGCACTCTATTAAGCATAAGTGGTGCACTGGTTCTCACATTTTACAAAGGAGTAGAGCTCAATTTGTGGTCAACTAACATCAACTTGCTGCATCATGGTGCAGCAACCTCACAGCAATCATCTAATGATCAAGTCTTGGGCTCAATCTTAGCTGTTGTTGCTTGTATGTGCTTTGCAGTTTGGTTGATAATCCAGGCCAAGATTAGTATGGTGTATCCAAGCTACTCTGGAACTGCTCTTACTTGTGTCTGTGCAGCGATTCAGTCAGTTGTATATGCCATGTGTGCTGAGAAGGAATGGTCAGCATGGAAACTTGGTTGGAACATAAGACTTCTCACTGTTGTTTACACGGGAGTGTGGGCCACTGGATTGATGGTTGCAATAATGAGCTGGGCTGCAAGGCTGAGGGGGCCATTGTTTGTATCTTCTTTCTATCCCTTAATGCTTGTAACTGTTGCAATACTGGGGTCTCTCTTACTCGACGAGCAACTATACTTGGGAAGCATAATAGCAGTAGTGTTGATCGTAGTGGGCTTGTATGGTGTTTTGTGGGGAAAAGGCAAGGAGATGAAGCAGAACGACCAAATAGATGGAGCAAAAAGCTCTACGGAGCCAGAATTGAGAGGCATTGTCATAGAAACCTCATCTAGTACTAAGGGTAAACCGACCGCAACAAGTACTATTTGTCCCATCCAAGCTGCTGACCGAGGATCTGGTGCGGTTTCTCCTGCTGCAGTGGTGCATGAATAG 963 0.4476 MTWMIFLQGSLCGLFGGSLGQNLYAESLTLTSATFAAAMTNIIPAMAFVLAIVLRMERLAIGTVAGKSKVLGTLLSISGALVLTFYKGVELNLWSTNINLLHHGAATSQQSSNDQVLGSILAVVACMCFAVWLIIQAKISMVYPSYSGTALTCVCAAIQSVVYAMCAEKEWSAWKLGWNIRLLTVVYTGVWATGLMVAIMSWAARLRGPLFVSSFYPLMLVTVAILGSLLLDEQLYLGSIIAVVLIVVGLYGVLWGKGKEMKQNDQIDGAKSSTEPELRGIVIETSSSTKGKPTATSTICPIQAADRGSGAVSPAAVVHE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1415 320 SUPERFAMILY Multidrug resistance efflux transporter EmrE 173 259 - -
Vvi4g1415 320 Pfam EamA-like transporter family 117 254 IPR000620 GO:0016020
Vvi4g1415 320 PANTHER WAT1-RELATED PROTEIN 1 265 IPR030184 GO:0016020|GO:0022857
Vvi4g1415 320 SUPERFAMILY Multidrug resistance efflux transporter EmrE 6 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1415 Vvi-Chr4 21087493 21089823 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1415 1 278 Nodulin-like Gene Family AT1G25270 38.947 5.67e-64 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1415 - - vvi:100255715 596.66