Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1414 ATGGTGCTGCAGCATTACAAGATTTGGTTGATAGTCCAGACTAAGATGAGCATGGTATATCCAAGCTACTCCGGAACTGCTCTAATGTGTGTTTGTGCATCAATTCAATCGGTTGTATATGCCATGTGCACTGAGAGGGACTGGTCCGCATGGAAACTTGGTTGGGACATTAGGCTTCTCACTGTTGTTTACTCAGGAGTGTTGGCCTCTGGATTAATGGTTACACTAATGACCTGGGTTTCAAGGATGAGAGGCCCATTGTTTGTATCTTCTTTCTTTCCCTTAATGCTTGCAACCGTTGCAATACTTGGGTCACACTTACTCCACGAACAGCTACATATAGGAAGCATAATTGCAGCAGTGTTGATCATAGTGGGCTTGTATATTGTTTTATAG 396 0.4318 MVLQHYKIWLIVQTKMSMVYPSYSGTALMCVCASIQSVVYAMCTERDWSAWKLGWDIRLLTVVYSGVLASGLMVTLMTWVSRMRGPLFVSSFFPLMLATVAILGSHLLHEQLHIGSIIAAVLIIVGLYIVL* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1414 131 Pfam EamA-like transporter family 8 131 IPR000620 GO:0016020
Vvi4g1414 131 PANTHER WAT1-RELATED PROTEIN 6 131 IPR030184 GO:0016020|GO:0022857
Vvi4g1414 131 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1414 Vvi-Chr4 21075195 21076024 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1414 8 131 Nodulin-like Gene Family AT1G25270 43.200 7.42e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1414 - - vvi:100255715 248.44