Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1391 ATGGGAGGCCTATTTCATCTTTTTGATTTCAATCAAAGCAGCATGGCCAGAAAAGTTCTTGCACATAAGAGGCATGTGGGCGGCTTGGAAGCTCCTCGAAACAGCTTGGAGTTGCCAATAGAAACTTCTCAGGGCTATTATGCTGTAGGAGACAGTGTGCCGAACTCTTACCAAGTGCAACAGGACTGGGCAGGAAAGAACTGTCATCCAACTGAGGCTTCAATGAAGAAGTTGATCAATCAGGAGATGTCCAAACGATCAAACACCAGACACAACACACCAAGTATTGTGGCCCGGCTGATGGGAATGGACATGTTACCACTGGATACAAAATCGGTAGTTCAGCCAATTGAAAAAAGGAATGTAGCTGAAATCAATTTTTCAAAGAAGGGACGGGAACGGACTGAAAATGGCTCCATTGGCCATGCCCCTCTTAACCCAAATTCTTCCAGGCAGATGGAGTGCAACTCATTTCACCGCAATAAAGACAGAGATCCTGATCGATCAAGCAGGAACCAGAAGTTGGGAAAACCAAGGCCTCGTGAACATCCACAGGAGGAGGAACTACAGAAGTTCAAGAAAGAGTTTGAAGCATGGCAAGCAGCCAGGTTTAGGGAATGTGCAAGTGTTGTGGAGCTTGACAGCATTCCTAGGAAGCTGCTTGCTCAAGAGAACCTCAACAAGGAAAAGAGGGCTATTTATTCTAATTCTGGAATAATAGCAAATGAGAAGCCTGTAGAACTTAAGGGTAATGACATTAAAGCAAGGTATCATGGAAGAAGTGGTCTGCAACATAATGGACATAAACTGGAACTATACCCAGATGAGCAGAAGGAATATTTTTCTTTAAGTAGATCCACAAGCAGAGACTTTGATCAGTCCCCCATGATGAATTGTGATAAGAAACTGGAAAAATCTTCTGCCCCCACAAGGATAGTGATCCTAAAGCCTGGTCCTGATAGGATTGGCAACACTGATGAGTCTTGGGCCAGTTCCTCAGGTACTTTAGAGGAGAGAGATAGCATAGAAGATTTTCTTGAGGAGGTGAAGGAAAGGTTGAAACATGAACTCCAAGGGAAAACTCGTAAGAGGGTTACATTGGTCAGAGGAGGTGGAATTGAGACCCCTTTTAGTGAAAGGCCATCAGAACCAAAACAAATAGCTCAGCATATAGCAAAACAGGTTCGAGAAAGTGTTACCAGGGACCTTGGAATGAATTTGCTTCGATCGGAATCAACTAGATCATATAGAAGTGAAATTCAGTTAAATGGATCAGGTTCCCCAGAGTTCATCAACAGAGATACTAGGAAATTCTTGTCAGAGAGGTTGAGGAATGTTCTAAAGAGAGAAACACATCAGGATATCCCCATAGTTGTCAACGGCAGCTCAAGGCCGTCAATGTTAGATTATGAAAGGAACAGACTAGAACAGACAGGGGATAACTTGAAGGCTGGAAACAGGATGAACCACTGGGAGAATGTCAACAATGAAGCAGAAATGCAAACTAGATCTTTCAGACATGGGCCAGATGATGATGCAGTTATCCACAGAGAATCGTCTCCTAGGAACCTCATTAGATCTTTATCAGCCCCAGTATCTGGAACATCATTTGGGAAGCTCCTTCTAGAGGACCGCCGCATTTTAACTGGTGCTCATATAAGGAGGAAGCATGAAGTCACTGAAAACTTGTCAGTGGATGTGAAGAAAGGGAGCAAAGAAAAATTTAATCTAAAAGAAAAGGTTTCGAATTTCAAATATAGTTTCACATTTAGAGGGAGGTTATTTGGCAGAAAGATTCAGTCAGCAGTGGAATCATGTGGAATCGAACATGATCCCATGAAAGACATCATGAGCGGACCAACGGTTATTATGAATTTGGGTGACCGGCATGAGAACTCCACTGAGGTGCCTCCAAGCCCTGCATCAGTGTGCAGCAGTGCTCATGAAGAATTCTTCAGACCTGGTGATTATGTCAGTCCAGTATCAACACCGGATTTACCTTTGGTAGAAGATTACCCAGTACCACATCTTTTTAGGGAGATCAGCTCTAACCTTAATGAGCTTCGGAGGCAACTAGACCAACTTGGATCCAATGGGTCTGAGGACACAACAATTGACGAGGAACCACCAGAGGTTGAAATAATTGAATTGGAGGACCAGGCAGAGGCTTACATAAGAGATCTGCTTGTTGCTTCTGGTTTCTATGGTGGATCATCTGATACAGTTTTATCAAGATGGGACCCACTTGCAAGGCCTATCAGCAACCGGGTCTTTGACAAGGTGGAAGAGTCCTACAAAAAATTGGCTAAGGATAGCGAAGGGTCCCCAGAGGCTGACGGTGAGAAGAAGGTAGATCACAAAGTGTTACTTGATTTATTGAATGAAGCACTTTCGACTGTTCTTGGACCGCCCGTGGGCATGTCCAGATTCAGAAGAAAATTTATGGGTTCTACTATGTTGTCTGCTCCACATGGAAAGAAATTACTGGATTGTGTATGGGAGATTATCCGTGTGCATGTGTACCCTCCAGCTGACAAATCTTGTTACTCGCTTGATAGTATGGTGGCTAGGGATCTGGGTTCAATTCCCTGGTCCGGACTGATTGATGATGAGATGAATGCTCTGGGAAGAGATATGGAATCTATGATTATTGGAGGTCTGGTTGATGAAATTGTGAAGGATATGCTGTTATAA 2694 0.4365 MGGLFHLFDFNQSSMARKVLAHKRHVGGLEAPRNSLELPIETSQGYYAVGDSVPNSYQVQQDWAGKNCHPTEASMKKLINQEMSKRSNTRHNTPSIVARLMGMDMLPLDTKSVVQPIEKRNVAEINFSKKGRERTENGSIGHAPLNPNSSRQMECNSFHRNKDRDPDRSSRNQKLGKPRPREHPQEEELQKFKKEFEAWQAARFRECASVVELDSIPRKLLAQENLNKEKRAIYSNSGIIANEKPVELKGNDIKARYHGRSGLQHNGHKLELYPDEQKEYFSLSRSTSRDFDQSPMMNCDKKLEKSSAPTRIVILKPGPDRIGNTDESWASSSGTLEERDSIEDFLEEVKERLKHELQGKTRKRVTLVRGGGIETPFSERPSEPKQIAQHIAKQVRESVTRDLGMNLLRSESTRSYRSEIQLNGSGSPEFINRDTRKFLSERLRNVLKRETHQDIPIVVNGSSRPSMLDYERNRLEQTGDNLKAGNRMNHWENVNNEAEMQTRSFRHGPDDDAVIHRESSPRNLIRSLSAPVSGTSFGKLLLEDRRILTGAHIRRKHEVTENLSVDVKKGSKEKFNLKEKVSNFKYSFTFRGRLFGRKIQSAVESCGIEHDPMKDIMSGPTVIMNLGDRHENSTEVPPSPASVCSSAHEEFFRPGDYVSPVSTPDLPLVEDYPVPHLFREISSNLNELRRQLDQLGSNGSEDTTIDEEPPEVEIIELEDQAEAYIRDLLVASGFYGGSSDTVLSRWDPLARPISNRVFDKVEESYKKLAKDSEGSPEADGEKKVDHKVLLDLLNEALSTVLGPPVGMSRFRRKFMGSTMLSAPHGKKLLDCVWEIIRVHVYPPADKSCYSLDSMVARDLGSIPWSGLIDDEMNALGRDMESMIIGGLVDEIVKDMLL* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1391 897 Coils Coil 678 698 - -
Vvi4g1391 897 Coils Coil 343 363 - -
Vvi4g1391 897 Pfam DUF761-associated sequence motif 93 107 IPR032795 -
Vvi4g1391 897 MobiDBLite consensus disorder prediction 141 155 - -
Vvi4g1391 897 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 896 - -
Vvi4g1391 897 MobiDBLite consensus disorder prediction 156 189 - -
Vvi4g1391 897 Pfam Domain of unknown function (DUF4378) 723 890 IPR025486 -
Vvi4g1391 897 MobiDBLite consensus disorder prediction 125 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1391 75 895 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 41.128 2.03e-166 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1391 - - vvi:100260782 1763.43