Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1366 ATGTGGCCTATTGGTTTGTGCATAGTGACATTAGTTATCATATGGGTCACAAATTGGATTCATAGATGGAGGAACCCCAGATGCAATGGTACACTTCCTCCTGGCACCCTGGGCTTTCCATTCATTGGAGAAACCATTCAATTTTTCATTCCCGGCCACTCCTTGGATCTTCTACCATTCTTCAAGAAAAGAGAAATAGGATTCATTTTCTTTCATTTTATTTCATCAATTGAATATGGTCGTCTGTTCCGGACAAGCCTAGTGGGTCGACCGGTTGCGGTAGCAGCTGACCCTGAAGTGAACCATTTCATCCTTCAAGAAGAGGGGAAGTCGGTGGAAATGTTTTACTTGGATTCTATTGTTAAGCTTTTTGGGAAAGATGGGGCATCCACCCATGCAACCGGTCACGTTCACAAGTATCTCAGGACACTGGTTATGAATTACTTTGGCTTCGAGAGCCTCAGAGATAAGCTACTTCCTAAAGTGGAAGCAGTGGCTCGTAAAAGCTTAGACACTTGGTCGAGCCAACCATCTGTGGAACTGAATTATGCGATTTCACAGGTAATGTTTGAGTTCATATCGATGGAGCTGTTCAGTTATGATCCAAGCGCATCCACAGAAAGTATGAGCGATGCATTCATTAACTTTCTGAAGGGTCTAGTGTCTATCCCCTTGAACATTCCTGGTACAACTTTTCATAAATGTTTGAAGAACCAGAAGAAGGTAATGAAGATGCTGAGGGAGATAGTGGAGGAGAGGTGTGCTTCTCCTGAGAGACGCCATGGTGATGTTCTTGATTATTTCCTGGAAGAAATGAAAAGCAAAACATTCATAACAAAGGATTTTATTGTCTATATAATGTTTGGGCTTCTCTTTGCTACCTTCGAGTCGATCCCCACTATGTTCACTCTAGTCTTTAAATTAATAATGGAGCACCCACTGGTGTGGCAAGAATTGAAGGATGAGCATGAGGCTATTCTTAGAAATAGTCAGACTTCAAATTCCACAATCACATGGGAAGATTACAAGTCCATGACTTTCACATTTGATGTTATCAATGAGGCACTTAGAATGGGAAATATTAGTCTTGGGAGTTTTAGAAGAGCCGTGGAAGATGTAAGGATAAATGGATATACAATTCCAGCAGGGTGGATAATTTTAGTTGTCCCTTCAGCACTTCACATGGACCCTGAAACATACCCCGATCCTCTTGTTTTCAACCCATGGCGATGGAAGGAGGATGGGGGATCAAAGATCAGAGTTAAGAATTTCACACCTTTTGGAAGGGGTATACGCTCTTGTCCAGGGGCAGAACTCAGCAAGCTTGTGGCAGCCACATTCATCCATGCGGCAGTCACCAAATACAGGTTTACGAAAATTAAGGGAGGACGTGTAGTTCGAAATCCAATGTTGAAATTTAAGGATGGGTTTTACGTTAAGGTTTCGGAGATGGTCACTGAAGGTGGTGGCTCAGCTGCTGAAGATGCTTGA 1491 0.4272 MWPIGLCIVTLVIIWVTNWIHRWRNPRCNGTLPPGTLGFPFIGETIQFFIPGHSLDLLPFFKKREIGFIFFHFISSIEYGRLFRTSLVGRPVAVAADPEVNHFILQEEGKSVEMFYLDSIVKLFGKDGASTHATGHVHKYLRTLVMNYFGFESLRDKLLPKVEAVARKSLDTWSSQPSVELNYAISQVMFEFISMELFSYDPSASTESMSDAFINFLKGLVSIPLNIPGTTFHKCLKNQKKVMKMLREIVEERCASPERRHGDVLDYFLEEMKSKTFITKDFIVYIMFGLLFATFESIPTMFTLVFKLIMEHPLVWQELKDEHEAILRNSQTSNSTITWEDYKSMTFTFDVINEALRMGNISLGSFRRAVEDVRINGYTIPAGWIILVVPSALHMDPETYPDPLVFNPWRWKEDGGSKIRVKNFTPFGRGIRSCPGAELSKLVAATFIHAAVTKYRFTKIKGGRVVRNPMLKFKDGFYVKVSEMVTEGGGSAAEDA* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1366 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Vvi4g1366 496 FunFam Cytochrome P450 family protein 24 483 - -
Vvi4g1366 496 PRINTS E-class P450 group IV signature 394 412 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1366 496 PRINTS E-class P450 group IV signature 32 49 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1366 496 PRINTS E-class P450 group IV signature 418 434 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1366 496 PRINTS E-class P450 group IV signature 378 392 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1366 496 PRINTS E-class P450 group IV signature 345 361 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1366 496 Gene3D Cytochrome P450 25 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1366 496 Pfam Cytochrome P450 78 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1366 496 PANTHER CYTOCHROME P450 26 32 458 - -
Vvi4g1366 496 CDD CYP90-like 79 483 - -
Vvi4g1366 496 SUPERFAMILY Cytochrome P450 30 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1366 Vvi-Chr4 20530188 20532381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1366 1 483 Cytochrome P450 AT1G12740 43.408 9.93e-152 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1366 - - vvi:100267946 973.77