Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1319 ATGGCCTCTCCTAGCTCTGCAACAGAAGTCGTCACCATTGATGTTCATGCAGCTAAGGAGCTCACCAATTCAGGCTACCGTTATCTTGATGTCAGGACGGTTGAAGAGTTCAAGAAAGGCCATGCCGATGTTGAGAACATTCTGAACATCCCTTACCTCTTCACCACCCCTGAGGAAAGGCTGAAAATTCCTGAATTCTTGGAGCAGGTTCAGTCTGCTTGCAGCAAGGAAGATCATCTCGTCGTGGTAATTTTTCATTTGATTTCCGGATTGAATCATAACAAATATAATCTTGATGAATTTTCTGAAATTGTTTATTTATTCTCAATGAATGGATGTCTAGGTGGGGTGAGATCCCTTGCAGCCGCCTCTGTTCTTGTCAATGCTGGTTTCAAGGATGTGAAGGACATGGGAGGAGGCTATGAGGCATGGGTGGAAACTGGACTTACAGTCACCAAACCAAAAGAAGAAGAGAAGTGA 480 0.4417 MASPSSATEVVTIDVHAAKELTNSGYRYLDVRTVEEFKKGHADVENILNIPYLFTTPEERLKIPEFLEQVQSACSKEDHLVVVIFHLISGLNHNKYNLDEFSEIVYLFSMNGCLGGVRSLAAASVLVNAGFKDVKDMGGGYEAWVETGLTVTKPKEEEK* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1319 159 PANTHER THIOSULFATE SULFURTRANSFERASE 18 3 157 IPR044684 GO:0003824
Vvi4g1319 159 SMART rhod_4 13 150 IPR001763 -
Vvi4g1319 159 CDD RHOD 17 145 - -
Vvi4g1319 159 Gene3D - 2 152 IPR036873 -
Vvi4g1319 159 Pfam Rhodanese-like domain 20 146 IPR001763 -
Vvi4g1319 159 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 8 154 IPR036873 -
Vvi4g1319 159 ProSiteProfiles Rhodanese domain profile. 22 153 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1319 Vvi-Chr4 20126045 20126950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1319 1 157 Sulfurtransferasese or Rhodanese AT5G66170 39.490 1.26e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1319 - K15692 vvi:100260808 204.527