Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1292 ATGCAAACGATGTCCCATGCGCAAGGCCACCTCCATCACGCCACATCCATTTCATACTCGTCTTTCCCATACCCGCGGACATCTCTCACTCACCATCTTTCCATTCCTGCCAAACTCACAAAACCCTCATTCTTGGTGAGGATGGACTCCCGGAAGCATGGCGATTTCTCCCTCACGAGCCCCCTTGGAGGCGGTCGCCCTGGGAGAGTGAAGAGAAAGGGCTTGAAGGTGGCTGCCAAGAAGGCTGCTGGTGGAGCTGATGATGCCCGGTTGGAGAGGTGGGCTGTGAGGGAGTTTGGAGCCTTTGGGCTTGCCCATGGTGATGGATTTGGGTTTGGGTTGGAACCCAGCCCAAGCATGTTGAAGGAAGGCAATGTTTTCTCCAATAAGTGGGCTGTGATGGAGTTTGGAGTCTTAGGCTTGCCCATGGTGATGGGTATGGGTTTAAGTTGGAGCCCAGGCCCAAAGTTGCTGATGAAGGGCGTCATTGCTCCTCAAGCCAATCACTCTCATGGCCCATGCCCATTTCAGGATAGCCCATTTGGCTACTTCATTTCCAAATAA 564 0.5337 MQTMSHAQGHLHHATSISYSSFPYPRTSLTHHLSIPAKLTKPSFLVRMDSRKHGDFSLTSPLGGGRPGRVKRKGLKVAAKKAAGGADDARLERWAVREFGAFGLAHGDGFGFGLEPSPSMLKEGNVFSNKWAVMEFGVLGLPMVMGMGLSWSPGPKLLMKGVIAPQANHSHGPCPFQDSPFGYFISK* 188
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi4g1292 Vvi-Chr4 19817571 19818134 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1292 31 83 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 57.407 6.47e-14 65.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1292 K02997 - vvi:109123575 85.8853