Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1247 ATGAAGATGACGGGAAGCGGTGTGAATGGAATGATCGGCATGGAAGGGGGTAGGGTGGAGGAGAGCATAGGGGAGCTGAGACGAACCTTCAGAAGCGGAGAAACCCGAAGCGCTGCTTGGAGAAAAGCCCAGCTTAAAGCACTTCTCCAGCTGCTCCGCGACAATGAAAATAAGATCTTCGAAGCGCTTAAACAAGATCTTGGAAAGCATCCTGTGGAATCTTACAGAGATGAGCTTGGGGTTGTGGAAAAATCTGTCAAGTATTCTTTGAGCCATGTGGATGAATGGATGGCCCCCAAAAAGAGCTCATTGCCCTTGATTTTCTTCCCAGGAAAAGGACAAGTGCTGCCCGAACCACTTGGCCTGGTTCTCATATTCTCGTCTTGGAACTTCCCCATCTCACTGGCATTGGACCCTGTGATAGGAGCAATATCTGCAGGGAACTCAGTGGTTTTAAAACCTTCTGAGCAAGCCCCAGCATGCTCTTCCTTCCTAGCAAATACCATCCCTCTTTACCTGGACAGCAAAGCCATTAAAGTCATTGAAGGCGGAGCAGCAATCAGCCAACAATTACTGCAGCAAAAATGGGACAAGATTTTCTTTACTGGGAGTCCATCAGTGGCACGCATTGTCATGTCAGCTGCTGTGAAGCATTTAACGCCTGTTACTATAGAGCTGGGTGGGAAATGCCCTACCATCTTTGATAACCTTTCCAGCCCTTCAGATACAGAGGTCGCTGTTAAGAGGGTAGTTGGAGGAAAATGGGGGCCGTGCAATGGGCAAGCCTGCATAGGGGTCGATTATGTGCTTGTGGAAGAAAAGTTTGCCTCTCATCTGATTGAAATGCTGAAGAAGACCATCAAGAAATTCTATGGTGAAAACCCCAAAGAATTGAAGGACATCTCCAAAATTGTCAATAAGCACCATTTTCAGAGATTGCACAATCTTCTTAAAGAACCTCTTGTGGCGGCTTCCATAGTTCATGGTGGCTTAATAGATGAAGAGAAATTATTCATCGAGCCTACAATCTTGTTAGATCCTCCGCTTGATGCCGAGATCATGACAGAAGAAATCTTTGGCCCACTGCTTCCAATAATCACACTGAAAAACATAGAAGAAAGCATTGAATTCATAAACTCAAGGCCCAAACCCCTAGCCCTCTATGCCTTCACCAATGATGAAGCATTCAAGAGACGGATTCTATCAGAAACATCTTCAGGAAGTGTGACTTTTAATGATATCATTATTCAGTTTGTTTGCGACACATTGCCCTTTGGAGGTGTGGGACAGAGCGGGTTTGGGAGGTATCATGGGAAATACTCATTTGACACGTTCAGCCATGAAAAGGCAGTTCTGCGGAGAAGTTTTTTCCTTGAACTTGAGCCCAGGTTTCCTCCATGGAATGATTTCAAGCTAAAATTCATCAGATTGGTTTACAGCTTTGACTACCTTGGACTAATACTACTCTTGCTGGGGCTAAAGAGATAG 1488 0.4523 MKMTGSGVNGMIGMEGGRVEESIGELRRTFRSGETRSAAWRKAQLKALLQLLRDNENKIFEALKQDLGKHPVESYRDELGVVEKSVKYSLSHVDEWMAPKKSSLPLIFFPGKGQVLPEPLGLVLIFSSWNFPISLALDPVIGAISAGNSVVLKPSEQAPACSSFLANTIPLYLDSKAIKVIEGGAAISQQLLQQKWDKIFFTGSPSVARIVMSAAVKHLTPVTIELGGKCPTIFDNLSSPSDTEVAVKRVVGGKWGPCNGQACIGVDYVLVEEKFASHLIEMLKKTIKKFYGENPKELKDISKIVNKHHFQRLHNLLKEPLVAASIVHGGLIDEEKLFIEPTILLDPPLDAEIMTEEIFGPLLPIITLKNIEESIEFINSRPKPLALYAFTNDEAFKRRILSETSSGSVTFNDIIIQFVCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAVLRRSFFLELEPRFPPWNDFKLKFIRLVYSFDYLGLILLLLGLKR* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1247 495 Pfam Aldehyde dehydrogenase family 19 451 IPR015590 GO:0016491
Vvi4g1247 495 SUPERFAMILY ALDH-like 20 466 IPR016161 GO:0016491
Vvi4g1247 495 PIRSF ALDH 6 488 IPR012394 GO:0006081
Vvi4g1247 495 PANTHER ALDEHYDE DEHYDROGENASE 18 486 IPR012394 GO:0006081
Vvi4g1247 495 FunFam Aldehyde dehydrogenase 228 431 - -
Vvi4g1247 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 228 431 IPR016163 GO:0016620
Vvi4g1247 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 449 IPR016162 GO:0016491
Vvi4g1247 495 FunFam Aldehyde dehydrogenase 27 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1247 Vvi-Chr4 19380793 19383902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1247 19 495 Aldehyde Dehydrogenase Gene Family AT4G36250 65.199 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1247 K00128 - vvi:100247106 950.273