Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1225 ATGTCGGCGTTGGATAGAAGGAAGTGGGAATGGGAGAATGCCACCGCCGGCGCCATCGCCGGATTTGCGACCGTCGCTGCTATGCACCCTCTGGATGTCGTCCGTACTAGATTTGCAGTAAACGATGGCCGATTGACTAATCTTCCAACCTACAAGAACACTGCACACGCTATCTTCACGATCACTCGGCTGGAGGGATTGAGAGGGCTTTATGCTGGCTTCTATCCTGCAGTTCTAGGTTCAACTGTGTCATGGGGTCTATATTTTTTCTTCTATGGGAGAGCCAAACAAAGGTATTCTAAAAATGGGACACAGAAGCTAAGCCCTGGTCTTCATCTTGCTTCAGCTGCAGAAGCAGGAGCTTTGGTTTCTTTGTGCACTAATCCTATTTGGGTTATAAAAACAAGGCTGCAGCTTGAGACTCCTCTTCATCAAACCCGACCATACTCTGGGCTTTATGATGCTTTAAGAACCATACTTAAAGAGGAAGGATGGAGTGCACTTTATAGAGGGATTGCTCCTAGTCTTTTTCTCGTTTCTCATGGTGCTGTTCAGTTCATGGTGTATGAGGAACTTCGTAAATTTGTTGTTGAATTTAAGTGTAAAGAAAGTAACAAGAATCTTGGAAGTGATGCTAAATTGTTGGATTCAGTTGATTATGCTGTACTAGGAGCATCGTCTAAACTTGCTGCCATTCTCATGACATACCCATTTCAGGTTATTCGAGCTCGATTGCAGCAAAGACCTAATCGTGATGGAATTCCAAGATATATGGATAGTTGGCATGTTGTGAAGGAAACTGCACGTTTTGAAGGTTTTCGAGGCTTTTACAAGGGTATAACTCCAAGCATTCTGAAAAATCTACCCGCTGCTTCAATAACATTTGTTGTGTATGAGAATGTCCTGAACCTGCTGAGACTAAAAAGAAGGAATGACTGA 939 0.4356 MSALDRRKWEWENATAGAIAGFATVAAMHPLDVVRTRFAVNDGRLTNLPTYKNTAHAIFTITRLEGLRGLYAGFYPAVLGSTVSWGLYFFFYGRAKQRYSKNGTQKLSPGLHLASAAEAGALVSLCTNPIWVIKTRLQLETPLHQTRPYSGLYDALRTILKEEGWSALYRGIAPSLFLVSHGAVQFMVYEELRKFVVEFKCKESNKNLGSDAKLLDSVDYAVLGASSKLAAILMTYPFQVIRARLQQRPNRDGIPRYMDSWHVVKETARFEGFRGFYKGITPSILKNLPAASITFVVYENVLNLLRLKRRND* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1225 312 Pfam Mitochondrial carrier protein 11 102 IPR018108 -
Vvi4g1225 312 Pfam Mitochondrial carrier protein 219 306 IPR018108 -
Vvi4g1225 312 Pfam Mitochondrial carrier protein 106 197 IPR018108 -
Vvi4g1225 312 PRINTS Mitochondrial carrier protein signature 116 138 IPR002067 GO:0055085
Vvi4g1225 312 PRINTS Mitochondrial carrier protein signature 23 41 IPR002067 GO:0055085
Vvi4g1225 312 PRINTS Mitochondrial carrier protein signature 71 89 IPR002067 GO:0055085
Vvi4g1225 312 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 306 IPR044712 GO:0006862|GO:0055085
Vvi4g1225 312 FunFam folate transporter 1, chloroplastic isoform X1 1 103 - -
Vvi4g1225 312 FunFam Folate transporter 1, chloroplastic 104 310 - -
Vvi4g1225 312 Gene3D Mitochondrial carrier domain 11 303 IPR023395 -
Vvi4g1225 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 195 IPR018108 -
Vvi4g1225 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 304 IPR018108 -
Vvi4g1225 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 98 IPR018108 -
Vvi4g1225 312 SUPERFAMILY Mitochondrial carrier 11 300 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1225 Vvi-Chr4 19143417 19150047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1225 30 305 Chloroplast and Mitochondria Gene Families AT2G47490 35.689 1.55e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1225 K15115 - vvi:100248832 597.816