Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1199 ATGCTTATTGTCCAAAAAGCATTGAGAAGATTAACAAGTGAGAAAAGTGTTATTCCTGGTCGTCTGGGGTTGCCGCTTCTGGGTGAAACCTTCTCTTTTCTATCAGCCACTGGTAGTACAAAAGGATGCTATGATTTTGTGAGGCTAAGACGACTGTGGCATGGGAAATGGTTCAAGACAAGGATATTTGGCAAGGTCCATGTGTTTGTCCCAACTACTGATGGAGCAAAAACGATTTTCGCTAATGATTTGGTGCTTTTCAATAAGGGTTATGTGAAATCAATGGCAGATGTTGTAGGCAAGAAGAGCTTGCTATGTGTTCCTCAAGAGAGTCACAAAAGGATTAGGCGTCTTCTATCAGATCCTTTCTCCATGAATTCTTTGTCCAAGTTTGTCATGGAATTCGACAACATGCTGTACCAAAGACTCAACAAATTAGAAGAAGGGGGGAAAAGCTTTGTAGTGTTCGACTTCTGTATGAAGATAGCATTTGATGCAATATGCAACAGGCTAATAAGTGTCACCGAGGCTCCCTTGCTACAAGAGATTGAGAGAGACTGTACGTATGTTTCCAATGCTATGTTGTCATTTCCTCTCATGATCCCTGGCACCAGATACTACAAAGGTATCAAGGCAAGAAAACGTCTAATGGAAACCTTTGGAGAGATGATTAGCAGCAGGCGAAGTGGAAAGGAGTACTCTGATGACTTCTTGCAGTCCATGTTACAACGGGATTCATACCCGCCCAGTGAAAAGCTTGAAGACTCAGAGATTATGGATAACCTATTAACACTGATAATTGCAGGACAAACCACCACTGCGGCTGCAATGATGTGGAGTGTCAAGTTCTTGGATGAAAACGAAGAAGTCCAGGATAGGCTAAGGGAAGAGCAACTGTCAATAATCAGAAACAAAGCAGAAGGAGCCTTACTTACCCTTGAAGATCTAAACAGCATGTGCTATGGCTTACAGGTTGTGAAGGAAACATTGAGAATGTCAAATGTTTTATTGTGGTTTCCTCGTGTTGCACTTAATGACTGCAGAATTGAAGGTTTTGAAATAAAGAAAGGATGGCACCTCAACATTGATGCGACTTACATACACTTCGACCATAGTCTGTACAAGGACCCTATACAATTCAATCCTTCGAGATTTGATGAAGTGCCAAAGCCATACAGCTTCATGCCTTTTGGATCAGGACCAAGAACCTGCCTAGGAATTAATATGGCCAAAATGACAATGTTGGTGTTCTTAAGCCGGCTGACCAGTGGATTCAAGTGGAGAGTCGATGATCGAGATCCTTGCCTAGAAAAGAAGGCACACATTCCTAGACTGAGAAGTGGCTGCCCCATAACCTTAAGGACCCTAAAGAAGAGGGATATCATATAA 1389 0.4226 MLIVQKALRRLTSEKSVIPGRLGLPLLGETFSFLSATGSTKGCYDFVRLRRLWHGKWFKTRIFGKVHVFVPTTDGAKTIFANDLVLFNKGYVKSMADVVGKKSLLCVPQESHKRIRRLLSDPFSMNSLSKFVMEFDNMLYQRLNKLEEGGKSFVVFDFCMKIAFDAICNRLISVTEAPLLQEIERDCTYVSNAMLSFPLMIPGTRYYKGIKARKRLMETFGEMISSRRSGKEYSDDFLQSMLQRDSYPPSEKLEDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLDENEEVQDRLREEQLSIIRNKAEGALLTLEDLNSMCYGLQVVKETLRMSNVLLWFPRVALNDCRIEGFEIKKGWHLNIDATYIHFDHSLYKDPIQFNPSRFDEVPKPYSFMPFGSGPRTCLGINMAKMTMLVFLSRLTSGFKWRVDDRDPCLEKKAHIPRLRSGCPITLRTLKKRDII* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1199 462 PANTHER CYTOCHROME P450 26 17 428 - -
Vvi4g1199 462 FunFam cytochrome P450 90A1-like isoform X1 8 456 - -
Vvi4g1199 462 PRINTS E-class P450 group I signature 257 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1199 462 PRINTS E-class P450 group I signature 277 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1199 462 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1199 462 PRINTS E-class P450 group I signature 363 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1199 462 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1199 462 Gene3D Cytochrome P450 8 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1199 462 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1199 462 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1199 462 PRINTS P450 superfamily signature 324 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1199 462 PRINTS P450 superfamily signature 268 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1199 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Vvi4g1199 462 SUPERFAMILY Cytochrome P450 11 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1199 462 CDD CYP90-like 50 453 - -
Vvi4g1199 462 Pfam Cytochrome P450 23 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1199 Vvi-Chr4 18887977 18891508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1199 10 427 Cytochrome P450 AT1G19630 45.024 7.16e-128 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1199 - - vvi:100259055 931.398