Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1082 ATGGCTGGAGGCGGATCATCCGGAAGGTTGCCTACTTGGAAGGAGAGGGAGAACAACAAGAAGAGGGAGAGGAGAAGAAGGGCCATAGCTGCTAAGATATACGCGGGGCTTAGAGCTCAGGGCAACTACAAGCTTCCCAAGCACTGCGATAACAACGAGGTCTTGAAGGCTCTATGTTCTGAGGCTGGTTGGACCGTTGAAGAAGATGGCACCACCTACCGCAAGGGATGCAAACCACCCCCAACGGAAATTGCAGGCGCTTCGGCCAACATCAGTGCATGTTCTTCCATGCAACCAAGCCCACAGTCCTCATCCTTCCCAAGTCCTGTACCCTCTTACCATGCCAGCCCATCGTCCTCCTCTTTCCCGAGCCCCACTCGGTTTGATGGAAACCCCTCTTCATACCTCCTCCCTTTCCTCCGTAATTTAGCCTCGATTCCTACATCTCTCCCACCTCTTCGAATATCCAACAGTGCTCCTGTAACCCCGCCTCTTTCTTCCCCTACTTCGAGAGGTTCAAAGCGGAAACCTGACTGGGAATCCTTCTCAAATGGCTCCCTGAATTCCTTCCGCCACCCTCTATTTGCCGTATCAGCCCCCTCTAGTCCTACTCGCCGCAACCATCTTACACCTGCCACAATACCGGAATGTGATGAATCTGATGCCTCTACTGTTGATTCTGGTCGCTGGGTGAGTTTCCAGACAGTAGCACCCCAGGCAGCTCCATCTTCCCCTACATTTAATCTTGTAAAACCAGTGGCTATGGAGTGTTCTATCCCCAATGCAGTTGATGAGCATGGAGGTCTGGGCTGGGGTGCAGCAGCAGAGAGGGGCCGGCCAGAGTTTGAGTTTGAGAGTGGCAGAGTGAAGGCGTGGGAGGGTGAGAGAATTCATGAGGTAGGAGTGGATGAACTGGAGCTTACACTTGGGAGTGGGAAGACTCGTGGTTAA 951 0.531 MAGGGSSGRLPTWKERENNKKRERRRRAIAAKIYAGLRAQGNYKLPKHCDNNEVLKALCSEAGWTVEEDGTTYRKGCKPPPTEIAGASANISACSSMQPSPQSSSFPSPVPSYHASPSSSSFPSPTRFDGNPSSYLLPFLRNLASIPTSLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESFSNGSLNSFRHPLFAVSAPSSPTRRNHLTPATIPECDESDASTVDSGRWVSFQTVAPQAAPSSPTFNLVKPVAMECSIPNAVDEHGGLGWGAAAERGRPEFEFESGRVKAWEGERIHEVGVDELELTLGSGKTRG* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1082 316 MobiDBLite consensus disorder prediction 154 184 - -
Vvi4g1082 316 MobiDBLite consensus disorder prediction 1 26 - -
Vvi4g1082 316 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 2 315 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vvi4g1082 316 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 130 IPR008540 -
Vvi4g1082 316 MobiDBLite consensus disorder prediction 93 127 - -
Vvi4g1082 316 MobiDBLite consensus disorder prediction 154 172 - -
Vvi4g1082 316 MobiDBLite consensus disorder prediction 198 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1082 Vvi-Chr4 17662460 17664248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1082 9 316 BZR Transcription Factor Family AT1G75080 61.846 1.03e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vvi4g1082 BES1_N 5e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1082 K14503 - vvi:100249673 572.778