Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1020 ATGCCAGGAAGAACAGAGGTGGAACAGTTGCATAAAATTTTCAAGCTTTGTGGCTCTCCATCTGAGGATTATTGGAGAAAATCAAAGTTGCCACATGCAACCATATTTAAGCCCCAACAGCCTTATAGGCGCTGTGTTGCAGAAAAATTTAAAGACTTTCCTACACCTGCATTAGGGCTTATGGAAACACTTCTTTCCATAGATCCTACTGATCGTGGATCTGCAGCCTCTGCTCTTAAAAGTGAGTTCTTTACAGTAAAGCCACTTCCTTGTGATCCTTCAAGCTTGCCTAAGTATCCTCACAGTAAAGAGTTTGATGCAAAAGTACGAGATGAAGAAGCTAGAAGAGGACCTCTTCTAGAGTTACTGCAATCAGGGGATATAGATCTTTGCTTTGCCAATGAGGATGAAACAAGAGAGCTGTTAAGAGATGACGAAAATGCTAGTCCTGAGGCTGCTCTTGAATTTCTTGCTAAGCACTGCCAATGGGCAGTGGTGAGACTAGGTTCTAATAGATGCCTTGCAAAATGTGGAAGAGAGAGGTGGGTTGCAGTTGCTACAGAGTCATCCATTGTGGTCACCATTTGA 588 0.4286 MPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVAEKFKDFPTPALGLMETLLSIDPTDRGSAASALKSEFFTVKPLPCDPSSLPKYPHSKEFDAKVRDEEARRGPLLELLQSGDIDLCFANEDETRELLRDDENASPEAALEFLAKHCQWAVVRLGSNRCLAKCGRERWVAVATESSIVVTI* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1020 195 PANTHER SUGAR KINASE 115 186 - -
Vvi4g1020 195 Gene3D Transferase(Phosphotransferase) domain 1 1 91 - -
Vvi4g1020 195 SUPERFAMILY Protein kinase-like (PK-like) 2 107 IPR011009 -
Vvi4g1020 195 Gene3D - 92 195 IPR029056 -
Vvi4g1020 195 SUPERFAMILY Ribokinase-like 105 184 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1020 Vvi-Chr4 16811746 16815259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1020 1 116 Core Cell Cycle Gene Families AT5G10270 48.718 1.93e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1020 - - vvi:104879163 246.128