Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1017 ATGGGTATTCGTTTGCCCTCAGTGATTACTAATGTGAAGCAAATCCTTAAACTGCAGAGGGATGTTCCAAGAGGACATCTAGCTGTTTATGTGGGAGATATCGAGACGAGGAAGCGATTTGTTGTCCCGGTATCTTACTTGAATCATCCTTCATTCCAAGACTTGTTGAGGCAGGCAGAGGAAGAGTTTGGATTTGATCATCCAATGGGAGGTCTTACATTTCCTTGCAAAGAAGACACTTTTGTTGATCTCACTACTCAATTGGGTGCCTCATAA 276 0.4275 MGIRLPSVITNVKQILKLQRDVPRGHLAVYVGDIETRKRFVVPVSYLNHPSFQDLLRQAEEEFGFDHPMGGLTFPCKEDTFVDLTTQLGAS* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1017 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 88 IPR003676 GO:0009733
Vvi4g1017 91 Pfam Auxin responsive protein 17 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1017 Vvi-Chr4 16785387 16785662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1017 21 81 Calmodulin-binding Proteins AT5G20810 57.377 1.95e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1017 K14488 - vvi:109122469 187.578