Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1015 ATGGGTATTCGTTTGCCCTCAGTGATTAGTAACGCGAAGCAAATCCTCAAACTGCAGTCTGTCCATATTAGAAGTCAGTCGGATGTTCCAAAAGGGCATTTTGCAGTTTATGTGGGAGAAATTCAGAAGAAGCGATTTGTGGTACCAATATCTTACTTGAATCATCCTTCATTCCAAGACTTGTTGCAGCAGGCAGAGGAAGAGTTTGGATTTAATCATTCTATGGGTGGTCTAACAATTCCTTGCAAAGAAGAGACTTTCATTGATCTTGCTTCTCAATTGAGTGCCTCATAA 294 0.4048 MGIRLPSVISNAKQILKLQSVHIRSQSDVPKGHFAVYVGEIQKKRFVVPISYLNHPSFQDLLQQAEEEFGFNHSMGGLTIPCKEETFIDLASQLSAS* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1015 97 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 94 IPR003676 GO:0009733
Vvi4g1015 97 Pfam Auxin responsive protein 11 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1015 Vvi-Chr4 16779771 16780064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1015 28 87 Calmodulin-binding Proteins AT3G43120 58.333 1.67e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1015 K14488 - vvi:100261630 194.512