Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1014 ATGGGTTTCCGTTTGCCCTCAATTATTCAAGCTAAGAAGATCCTCAAACTGCAATCTCTTCTTACCAGAAGTCAGCTATCTATATCAGCAACAACAGCAGAGGTGCCAAAAGGCCACTTTGCAGTTTATGTTGGAGAAGCTCAAAAGAAGCGATTTGTGCTTCCAATATCTTACCTGAACAATCCTTCATTCCAGAAATTGTTGAGTTGTGCTGAGGAAGAATTCGGCTTCAATCATCCAATGGGTGGTGTCACAATCCCATGCAAGGAAGATGCTTTCATTCATCTCACTTCTCAGCTACATTCAATATGA 312 0.4135 MGFRLPSIIQAKKILKLQSLLTRSQLSISATTAEVPKGHFAVYVGEAQKKRFVLPISYLNNPSFQKLLSCAEEEFGFNHPMGGVTIPCKEDAFIHLTSQLHSI* 104
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1014 103 Pfam Auxin responsive protein 17 98 IPR003676 GO:0009733
Vvi4g1014 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 25 100 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi4g1014 Vvi-Chr4 16775970 16776281 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1014 12 96 Calmodulin-binding Proteins AT3G43120 37.931 7.19e-15 64.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1014 K14488 - vvi:100256532 207.223