Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1012 ATGGGTATTCGTTTCCCCTCAATTGTTCAGGCCAAACAGATTCTCAAATTGCATTCTCCTTTTACTAGAAGTCAATCATCTATCTCAACAGAAGCATCAGAGGTGCCAAAAGGCCATTTTGCAGTTTATGTTGGAGAAGGCCAAAGGAAGCGATTTGTGGTTCCATTATCTTACCTGAACAATCCTTCATTCCAGAAATTATTGAGTCATGCAGAGGAAGAATTTGGCTTCAATCATCCAATGGGTGGTGTCACAATCCCCTGCAATGAAGATGCTTTCATAGATATCACTTCTTGA 297 0.404 MGIRFPSIVQAKQILKLHSPFTRSQSSISTEASEVPKGHFAVYVGEGQRKRFVVPLSYLNNPSFQKLLSHAEEEFGFNHPMGGVTIPCNEDAFIDITS* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1012 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 27 98 IPR003676 GO:0009733
Vvi4g1012 98 Pfam Auxin responsive protein 19 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1012 Vvi-Chr4 16767618 16767914 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1012 7 98 Calmodulin-binding Proteins AT4G34750 44.565 3.14e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1012 K14488 - vvi:100263233 200.675