Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1008 ATGGGTATCCGTTTGCCCTCCATGGGTCAAGCCAAGCAGATTCTAAAACTACAGTCACTTCTTTCCAGAAATCAGGCAGAGGTCCCTAAAGGCCATTTTGCAATTTACGTTGGGGAAGTCAAGAAGAAGCGGTATGTGGTTCCAATATCTTACTTGGACCATCCTTCATTCAGATCCTTGCTAAGTCAGGCTGAGGAAGAATTTGGCTTCAATCATCCAATGGGTGGTCTCACCATTCCATGCAAGGAACATGCTTTTCTTGATCTCACTTCTCAACTACAGATTTCATGA 291 0.4399 MGIRLPSMGQAKQILKLQSLLSRNQAEVPKGHFAIYVGEVKKKRYVVPISYLDHPSFRSLLSQAEEEFGFNHPMGGLTIPCKEHAFLDLTSQLQIS* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1008 96 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 93 IPR003676 GO:0009733
Vvi4g1008 96 Pfam Auxin responsive protein 11 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1008 Vvi-Chr4 16740481 16740771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1008 12 91 Calmodulin-binding Proteins AT4G34750 45.783 3.89e-17 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1008 K14488 - vvi:100244422 194.512