Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1007 ATGGTTCAAGCCAAGCAGATTCTCAAACTACAGTCACTTCTTTCTAAAAATCGAGCACAGGTCCCTAAAGGCCATTTTGCAGTTTATGTTGGGGAAGTTGACAAGAAGCGCTATGTGGTTCCAATATCTTACTTGAACAATCCTTCATTCAGATCCTTGCTATGTCAGGCTGAGGAAGAATTTGGGTACAATCATACAATGGGTGGTCTCACTATTCCATGTGAGGAACATGCTTTACTCGATCTTGCTTCTCGACTACAGGCATCATGA 270 0.4222 MVQAKQILKLQSLLSKNRAQVPKGHFAVYVGEVDKKRYVVPISYLNNPSFRSLLCQAEEEFGYNHTMGGLTIPCEEHALLDLASRLQAS* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1007 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 4 86 IPR003676 GO:0009733
Vvi4g1007 89 Pfam Auxin responsive protein 9 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1007 Vvi-Chr4 16735502 16735771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1007 5 82 Calmodulin-binding Proteins AT4G34750 45.679 1.93e-15 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1007 K14488 - vvi:100261544 171.785